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Stomach contents analysis of Tursiops aduncus and Sousa plumbea stranded along the United Arab Emirates coastline

Alkhamis, Razan, Malcolm J. Smale, Mark J. Beech, Robert L. Brownell Jr., Henrik Stahl, and Ada Natoli
In press (available online)
Marine Mammal Science
https://doi.org/10.1111/mms.13086
Stomach contents analysis of Tursiops aduncus and Sousa plumbea stranded along the United Arab Emirates coastline Alkhamis, Razan, Malcolm J. Smale, Mark J. Beech, Robert L. Brownell Jr., Henrik Stahl, and Ada Natoli Marine Mammal Science
IP--Alkhamis
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Estimating spawning Green Sturgeon (Acipenser medirostris Ayres, 1854) abundance in the Sacramento River using side-scan sonar and N-mixture models

Battaile, Brian Charles, Ethan A. Mora, Brendan Lehman, and Peter N. Dudley
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2023-0228
Estimating spawning Green Sturgeon (Acipenser medirostris Ayres, 1854) abundance in the Sacramento River using side-scan sonar and N-mixture models Battaile, Brian Charles, Ethan A. Mora, Brendan Lehman, and Peter N. Dudley Canadian Journal of Fisheries and Aquatic Sciences
IP--Battaile
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Growth of juvenile red abalone (Haliotis rufescens) co-cultivated with two densities of warty sea cucumber (Apostichopus parvimensis)

Bauer, Jeremie, Rodrigo Beas-Luna, Ricardo Searcy-Bernal, Fiorenza Micheli, Leonardy Vazquez-Vera, Charles Boch, Eugenio Carpizo-Ituarte, Fabioloa Lafarga-De la Cruz, Gabriela Montano-Moctezuma, and Julio Lorda
In press (available online)
New Zealand Journal of Marine and Freshwater Research
https://doi.org/10.1080/00288330.2024.2317886
Growth of juvenile red abalone (Haliotis rufescens) co-cultivated with two densities of warty sea cucumber (Apostichopus parvimensis) Bauer, Jeremie, Rodrigo Beas-Luna, Ricardo Searcy-Bernal, Fiorenza Micheli, Leonardy Vazquez-Vera, Charles Boch, Eugenio Carpizo-Ituarte, Fabioloa Lafarga-De la Cruz, Gabriela Montano-Moctezuma, and Julio Lorda New Zealand Journal of Marine and Freshwater Research
IP--Bauer
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An integrated population model and sensitivity assessment for a data poor population of green sturgeon

Dudley, Peter N., Ethan A. Mora, Nick A. Friedenberg, and Phaedra Doukakis
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2023-0147
An integrated population model and sensitivity assessment for a data poor population of green sturgeon Dudley, Peter N., Ethan A. Mora, Nick A. Friedenberg, and Phaedra Doukakis Canadian Journal of Fisheries and Aquatic Sciences
IP--Dudley
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Photo-identification and satellite telemetry connect southern right whales from South Georgia Island (Islas Georgias del Sur) with multiple feeding and calving grounds in the southwest Atlantic

Kennedy, Amy S., et al.
In press (available online)
Marine Mammal Science
https://doi.org/10.1111/mms.13089
Photo-identification and satellite telemetry connect southern right whales from South Georgia Island (Islas Georgias del Sur) with multiple feeding and calving grounds in the southwest Atlantic Kennedy, Amy S., et al. Marine Mammal Science
IP--Kennedy
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A two-dimensional, reach-scale implementation of Space Time Image Velocimetry (STIV) and comparison to Particle Image Velocimetry (PIV)

Legleiter, Carl J., Paul J. Kinzel, Frank L. Engel, Lee R. Harrison, and Gregory Hewitt
In press (available online)
Earth Surface Processes and Landforms
https://doi.org/10.1002/esp.5878
A two-dimensional, reach-scale implementation of Space Time Image Velocimetry (STIV) and comparison to Particle Image Velocimetry (PIV) Legleiter, Carl J., Paul J. Kinzel, Frank L. Engel, Lee R. Harrison, and Gregory Hewitt Earth Surface Processes and Landforms
IP--Legleiter
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Catch as catch can: markets, availability, and fishery closures drive distinct responses among the U.S. West Coast coastal pelagic species fleet segments

Quezada, Felipe J., Desiree Tommasi, Timothy H. Frawley, Barbara Muhling, Isaac Kaplan, and Stephen Stohs
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2023-0094
Catch as catch can: markets, availability, and fishery closures drive distinct responses among the U.S. West Coast coastal pelagic species fleet segments Quezada, Felipe J., Desiree Tommasi, Timothy H. Frawley, Barbara Muhling, Isaac Kaplan, and Stephen Stohs Canadian Journal of Fisheries and Aquatic Sciences
IP--Quezada
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Advancing bioenergetics-based modeling to improve climate change projections of marine ecosystems

Rose, K., et al.
In press (available online)
Marine Ecology Progress Series
https://doi.org/10.3354/meps14535
Advancing bioenergetics-based modeling to improve climate change projections of marine ecosystems Rose, K., et al. Marine Ecology Progress Series
IP--Rose
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Micrometer-scale structure in shark vertebral centra

Stock, S.R., U. Kierdorf, K.C. James, P.D. Shevchenko, L.J. Natanson, S. Gomez, and H. Kierdorf
In press (available online)
Acta Biomaterialia
https://doi.org/10.1016/j.actbio.2024.01.033
Micrometer-scale structure in shark vertebral centra Stock, S.R., U. Kierdorf, K.C. James, P.D. Shevchenko, L.J. Natanson, S. Gomez, and H. Kierdorf Acta Biomaterialia
IP--Stock
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Plasticity in gill morphology and function

Wegner, Nicholas C., and Anthony P. Farrell
In press (available online)
In: Sarah L. Alderman and Todd E. Gillis (eds.), Encyclopedia of Fish Physiology (2nd ed.). Academic Press.
https://doi.org/10.1016/B978-0-323-90801-6.00028-8
Plasticity in gill morphology and function Wegner, Nicholas C., and Anthony P. Farrell In: Sarah L. Alderman and Todd E. Gillis (eds.), Encyclopedia of Fish Physiology (2nd ed.). Academic Press.
IP--Wegner
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Selection of planning unit size in dynamic management strategies to reduce human-wildlife conflict

Welch, Heather, Owen R. Liu, Leena Riekkola, Briana Abrahms, Elliott L. Hazen, and Jameal F. Samhouri
In press (available online)
Conservation Biology
https://doi.org/10.1111/cobi.14201
Selection of planning unit size in dynamic management strategies to reduce human-wildlife conflict Welch, Heather, Owen R. Liu, Leena Riekkola, Briana Abrahms, Elliott L. Hazen, and Jameal F. Samhouri Conservation Biology
IP--Welch
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Trophoscapes of predatory fish reveal biogeographic structuring of spatial dietary overlap and inform fisheries bycatch patterns

Wells, Brian K., Jarrod A. Santora, Joseph J. Bizzarro, Alicia Billings, Richard E. Brodeur, Elizabeth A. Daly, John C. Field, Kate E. Richerson, and James T. Thorson
In press (available online)
Marine Ecology Progress Series
https://doi.org/10.3354/meps14319
Trophoscapes of predatory fish reveal biogeographic structuring of spatial dietary overlap and inform fisheries bycatch patterns Wells, Brian K., Jarrod A. Santora, Joseph J. Bizzarro, Alicia Billings, Richard E. Brodeur, Elizabeth A. Daly, John C. Field, Kate E. Richerson, and James T. Thorson Marine Ecology Progress Series
IP--Wells
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Evaluating robustness of harvest control rules to climate-driven variability in Pacific sardine recruitment

Wildermuth, Robert P., Desiree Tommasi, Peter Kuriyama, James Smith, and Isaac Kaplan
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2023-0169
Evaluating robustness of harvest control rules to climate-driven variability in Pacific sardine recruitment Wildermuth, Robert P., Desiree Tommasi, Peter Kuriyama, James Smith, and Isaac Kaplan Canadian Journal of Fisheries and Aquatic Sciences
IP--Wildermuth
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An updated model of potential habitat for northern stock Pacific Sardine (Sardinops sagax) and its use for attributing survey observations and fishery landings

Zwolinski, Juan P., and David A. Demer
In press (available online)
Fisheries Oceanography
https://doi.org/10.1111/fog.12664
An updated model of potential habitat for northern stock Pacific Sardine (Sardinops sagax) and its use for attributing survey observations and fishery landings Zwolinski, Juan P., and David A. Demer Fisheries Oceanography
IP--Zwolinski
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Phylogeography of the Pacific Sardine, Sardinops sagax, across its Northeastern Pacific range

Adams, Ella, and Matthew Craig
In press
Bulletin of the Southern California Academy of Sciences
Phylogeography of the Pacific Sardine, Sardinops sagax, across its Northeastern Pacific range Adams, Ella, and Matthew Craig Bulletin of the Southern California Academy of Sciences
IP--Adams
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Early larvae of the Whitespeckled Rockfish, Sebastes moseri Eitner, Kimbrell and Vetter 1999 and the Dwarf-red Rockfish, S. rufinanus Lea and Fitch 1972 (Pisces: Sebastidae) identified by molecular methods

Charter, S.R., W. Watson, and J.R. Hyde
In press
U.S. Department of Commerce, NOAA Professional Paper NMFS
Early larvae of the Whitespeckled Rockfish, Sebastes moseri Eitner, Kimbrell and Vetter 1999 and the Dwarf-red Rockfish, S. rufinanus Lea and Fitch 1972 (Pisces: Sebastidae) identified by molecular methods Charter, S.R., W. Watson, and J.R. Hyde U.S. Department of Commerce, NOAA Professional Paper NMFS
IP--Charter
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Recovering age and length data from carcasses of filleted rockfish

Fritch, Kaila, Grant Waltz, Melissa Monk, Ellie Brauer, Zachary Kucinski, Chandler Skinner-Horne, and Dean Wendt
In press
Fishery Bulletin (U.S.)
Recovering age and length data from carcasses of filleted rockfish Fritch, Kaila, Grant Waltz, Melissa Monk, Ellie Brauer, Zachary Kucinski, Chandler Skinner-Horne, and Dean Wendt Fishery Bulletin (U.S.)
IP--Fritch
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Characterization and distribution of a 14 MB chromosomal inversion in native populations of rainbow trout (Oncorhynchus mykiss)

Hale, Matthew C., Devon E. Pearse, and Matthew A. Campbell
In press
G3: Genes|Genomes|Genetics
Characterization and distribution of a 14 MB chromosomal inversion in native populations of rainbow trout (Oncorhynchus mykiss) Hale, Matthew C., Devon E. Pearse, and Matthew A. Campbell G3: Genes|Genomes|Genetics
IP--Hale
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Revised taxonomy of eastern North Pacific killer whales (Orcinus Orca): Bigg's and resident ecotypes deserve species status

Morin, Phillip A., Morgan L. McCarthy, Charissa W. Fung, John W. Durban, Kim M. Parsons, William F. Perrin, Barbara L. Taylor, Thomas A. Jefferson, and Frederick I. Archer
In press
Royal Society Open Science
Revised taxonomy of eastern North Pacific killer whales (Orcinus Orca): Bigg's and resident ecotypes deserve species status Morin, Phillip A., Morgan L. McCarthy, Charissa W. Fung, John W. Durban, Kim M. Parsons, William F. Perrin, Barbara L. Taylor, Thomas A. Jefferson, and Frederick I. Archer Royal Society Open Science
IP--Morin
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The urban lives of green sea turtles: Insights into behavior in an industrialized habitat using an animal-borne camera

Mullaney, Cameron M., Jeffrey A. Seminoff, Garrett E. Lemons, Bryant Chesney, and Andrew S. Maurer
In press
Ecology and Evolution
The urban lives of green sea turtles: Insights into behavior in an industrialized habitat using an animal-borne camera Mullaney, Cameron M., Jeffrey A. Seminoff, Garrett E. Lemons, Bryant Chesney, and Andrew S. Maurer Ecology and Evolution
IP--Mullaney
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Gray whale (Eschrichtius robustus) post-mortem findings from December 2018 through 2021 during the Unusual Mortality Event in the Eastern North Pacific

Raverty, Stephen, et al.
In press
PLoS ONE
Gray whale (Eschrichtius robustus) post-mortem findings from December 2018 through 2021 during the Unusual Mortality Event in the Eastern North Pacific Raverty, Stephen, et al. PLoS ONE
IP--Raverty
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Beyond boundaries: Governance considerations for climate-driven habitat shifts of highly migratory marine species across jurisdictions

Santos, Bianca S., Elliott L. Hazen, Heather Welch, Nerea Lezama-Ochoa, Barbara A. Block, Daniel P. Costa, Scott A. Shaffer, and Larry B. Crowder
In press
npj Ocean Sustainability
Beyond boundaries: Governance considerations for climate-driven habitat shifts of highly migratory marine species across jurisdictions Santos, Bianca S., Elliott L. Hazen, Heather Welch, Nerea Lezama-Ochoa, Barbara A. Block, Daniel P. Costa, Scott A. Shaffer, and Larry B. Crowder npj Ocean Sustainability
IP--Santos
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Observations of skin color aberrations in four shark species off the coast of southern California

Skelton, Z.R., T.S. Prinzing, A.P. Nosal, Z. Vagner, P. Demman, P. Zerofski, and N.C. Wegner
In press
Environmental Biology of Fishes
Observations of skin color aberrations in four shark species off the coast of southern California Skelton, Z.R., T.S. Prinzing, A.P. Nosal, Z. Vagner, P. Demman, P. Zerofski, and N.C. Wegner Environmental Biology of Fishes
IP--Skelton2
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NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee

Watters, Diana (ed.), Joe Bizzarro, E.J. Dick, John Field, Tom Laidig, Melissa Monk, Nick Wegner, and William Watson
In press
In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Annual meeting of the TSC (2024). Pacific States Marine Fisheries Commission.
NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Watters, Diana (ed.), Joe Bizzarro, E.J. Dick, John Field, Tom Laidig, Melissa Monk, Nick Wegner, and William Watson In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Annual meeting of the TSC (2024). Pacific States Marine Fisheries Commission.
IP--Watters
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Expanded, compressed, or equal? Interactions between spawning window and stream thermal regime generate three responses in modeled juvenile emergence for Pacific salmon

Adelfio, Luca A., Steven M. Wondzell, Nathan J. Mantua, and Gordon H. Reeves
2024
Canadian Journal of Fisheries and Aquatic Sciences 81(5):573-588
https://doi.org/10.1139/cjfas-2023-0238
Expanded, compressed, or equal? Interactions between spawning window and stream thermal regime generate three responses in modeled juvenile emergence for Pacific salmon Adelfio, Luca A., Steven M. Wondzell, Nathan J. Mantua, and Gordon H. Reeves Canadian Journal of Fisheries and Aquatic Sciences 81(5):573-588
2024Adelfio
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Long-term strategies for studying rare species: results and lessons from a multi-species study of odontocetes around the main Hawaiian Islands

Baird, Robin W., Sabre D. Mahaffy, Brittany Hancock-Hanser, Tori Cullins, Kristi L. West, Michaela A. Kratofil, Daniel M. Barrios, Annette E. Harnish, and Paul C. Johnson
2024
Pacific Conservation Biology 30:PC23027
https://doi.org/10.1071/PC23027
Long-term strategies for studying rare species: results and lessons from a multi-species study of odontocetes around the main Hawaiian Islands Baird, Robin W., Sabre D. Mahaffy, Brittany Hancock-Hanser, Tori Cullins, Kristi L. West, Michaela A. Kratofil, Daniel M. Barrios, Annette E. Harnish, and Paul C. Johnson Pacific Conservation Biology 30:PC23027
2024Baird
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Shifting ocean conditions influence temporal variation in the fecundity of California Current rockfishes (Sebastes spp.)

Beyer, Sabrina G., Susan M. Sogard, David M. Stafford, Neosha S. Kashef, Abel Rodriguez, Suzanne H. Alonzo, and John C. Field
2024
Canadian Journal of Fisheries and Aquatic Sciences 81(6):781-795
https://doi.org/10.1139/cjfas-2023-0253
Shifting ocean conditions influence temporal variation in the fecundity of California Current rockfishes (Sebastes spp.) Beyer, Sabrina G., Susan M. Sogard, David M. Stafford, Neosha S. Kashef, Abel Rodriguez, Suzanne H. Alonzo, and John C. Field Canadian Journal of Fisheries and Aquatic Sciences 81(6):781-795
2024Beyer
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Michael F. Tillman 1943-2023 [obituary]

Brownell, Robert L. Jr., Linda L. Jones, Douglas P. DeMaster, Greg P. Donovan, Stephen B. Reilly, Rolland A. Schmitten, Jeffrey M. Breiwick, Robert Suydam, Daryl J. Boness, and William W. Fox Jr.
2024
Marine Mammal Science 40(1):326-331
https://doi.org/10.1111/mms.13100
Michael F. Tillman 1943-2023 [obituary] Brownell, Robert L. Jr., Linda L. Jones, Douglas P. DeMaster, Greg P. Donovan, Stephen B. Reilly, Rolland A. Schmitten, Jeffrey M. Breiwick, Robert Suydam, Daryl J. Boness, and William W. Fox Jr. Marine Mammal Science 40(1):326-331
2024Brownell
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A high-quality blue whale genome, segmental duplications, and historical demography

Bukhman, Yury V., Phillip A. Morin, Susanne Meyer, Li-Fang Chu, Jeff K. Jacobsen, Jessica Antosiewicz-Bourget, Daniel Mamott, Maylie Gonzales, Cara Argus, Jennifer Bolin, Mark E. Berres, Olivier Fedrigo, John Steill, Scott A. Swanson, Peng Jiang, Arang Rhie, Giulio Formenti, Adam M. Phillippy, Robert S. Harris, Jonathan M.D. Wood, Kerstin Howe, Bogdan M. Kirilenko, Chetan Munegowda, Michael Hiller, Aashish Jain, Daisuke Kihara, J. Spencer Johnston, Alexander Ionkov, Kalpana Raja, Huishi Toh, Aimee Lang, Magnus Wolf, Erich D. Jarvis, James A. Thomson, Mark J.P. Chaisson, and Ron Stewart
2024
Molecular Biology and Evolution 41(3):msae036 (22 p.)
https://doi.org/10.1093/molbev/msae036
A high-quality blue whale genome, segmental duplications, and historical demography Bukhman, Yury V., Phillip A. Morin, Susanne Meyer, Li-Fang Chu, Jeff K. Jacobsen, Jessica Antosiewicz-Bourget, Daniel Mamott, Maylie Gonzales, Cara Argus, Jennifer Bolin, Mark E. Berres, Olivier Fedrigo, John Steill, Scott A. Swanson, Peng Jiang, Arang Rhie, Giulio Formenti, Adam M. Phillippy, Robert S. Harris, Jonathan M.D. Wood, Kerstin Howe, Bogdan M. Kirilenko, Chetan Munegowda, Michael Hiller, Aashish Jain, Daisuke Kihara, J. Spencer Johnston, Alexander Ionkov, Kalpana Raja, Huishi Toh, Aimee Lang, Magnus Wolf, Erich D. Jarvis, James A. Thomson, Mark J.P. Chaisson, and Ron Stewart Molecular Biology and Evolution 41(3):msae036 (22 p.)
2024Bukhman
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Biologically Important Areas II for cetaceans within U.S. and adjacent waters - West Coast Region

Calambokidis, John, Michaela A. Kratofil, Daniel M. Palacios, Barbara A. Lagerquist, Gregory S. Schorr, M. Bradley Hanson, Robin W. Baird, Karin A. Forney, Elizabeth A. Becker, R. Cotton Rockwood, and Elliott L. Hazen
2024
Frontiers in Marine Science 11:1283231 (31 p.)
https://doi.org/10.3389/fmars.2024.1283231
Biologically Important Areas II for cetaceans within U.S. and adjacent waters - West Coast Region Calambokidis, John, Michaela A. Kratofil, Daniel M. Palacios, Barbara A. Lagerquist, Gregory S. Schorr, M. Bradley Hanson, Robin W. Baird, Karin A. Forney, Elizabeth A. Becker, R. Cotton Rockwood, and Elliott L. Hazen Frontiers in Marine Science 11:1283231 (31 p.)
2024Calambokidis
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Estimates of marine mammal, sea turtle, and seabird bycatch in the California large-mesh drift gillnet fishery: 1990-2023

Carretta, James V.
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-700. 66 p.
https://doi.org/10.25923/b3m4-8e23
Estimates of marine mammal, sea turtle, and seabird bycatch in the California large-mesh drift gillnet fishery: 1990-2023 Carretta, James V. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-700. 66 p.
2024Carretta
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Bellwethers of change: population modelling of North Pacific humpback whales from 2002 through 2021 reveals shift from recovery to climate response

Cheeseman, Ted, Jay Barlow, Jo Marie Acebes, Katherina Audley, Lars Bejder, Caitlin Birdsall, Olga Solis Bracamontes, Amanda L. Bradford, Josie Byington, John Calambokidis, Rachel Cartwright, Jen Cedarleaf, Andrea Jacqueline Garcia Chavez, Jens Currie, Rouenne Camille De Castro, Joelle De Weerdt, Nicole Doe, Thomas Doniol-Valcroze, Karina Dracott, Olga Filatova, Rachel Finn, Kiirsten R. Flynn, John Ford, Astrid Frisch-Jordan, Chris Gabriele, Beth Goodwin, Craig Hayslip, Jackie Hildering, Marie C. Hill, Jeff K. Jacobsen, M. Esther Jimenez-Lopez, Meagan Jones, Nozomi Kobayashi, Marc Lammers, Edward Lyman, Mark Malleson, Evgeny Mamaev, Pamela Martinez Loustalot, Annie Masterman, Craig O. Matkin, Christie McMillan, Jeff Moore, John Moran, Janet L. Neilson, Hayley Newell, Haruna Okabe, Marilia Olio, Christian D. Ortega-Ortiz, Adam A. Pack, Daniel M. Palacios, Heidi Pearson, Ester Quintana-Rizzo, Raul Ramirez Barragan, Nicola Ransome, Hiram Rosales-Nanduca, Fred Sharpe, Tasli Shaw, Ken Southerland, Stephanie Stack, Iain Staniland, Janice Straley, Andrew Szabo, Suzie Teerlink, Olga Titova, Jorge Urban-Ramirez, Martin van Aswegen, Marcel Vinicius, Olga von Ziegesar, Briana Witteveen, Janie Wray, Kymberly Yano, Igor Yegin, Denny Zwiefelhofer, and Phil Clapham
2024
Royal Society Open Science 11(2):231462 (19 p.)
https://doi.org/10.1098/rsos.231462
Bellwethers of change: population modelling of North Pacific humpback whales from 2002 through 2021 reveals shift from recovery to climate response Cheeseman, Ted, Jay Barlow, Jo Marie Acebes, Katherina Audley, Lars Bejder, Caitlin Birdsall, Olga Solis Bracamontes, Amanda L. Bradford, Josie Byington, John Calambokidis, Rachel Cartwright, Jen Cedarleaf, Andrea Jacqueline Garcia Chavez, Jens Currie, Rouenne Camille De Castro, Joelle De Weerdt, Nicole Doe, Thomas Doniol-Valcroze, Karina Dracott, Olga Filatova, Rachel Finn, Kiirsten R. Flynn, John Ford, Astrid Frisch-Jordan, Chris Gabriele, Beth Goodwin, Craig Hayslip, Jackie Hildering, Marie C. Hill, Jeff K. Jacobsen, M. Esther Jimenez-Lopez, Meagan Jones, Nozomi Kobayashi, Marc Lammers, Edward Lyman, Mark Malleson, Evgeny Mamaev, Pamela Martinez Loustalot, Annie Masterman, Craig O. Matkin, Christie McMillan, Jeff Moore, John Moran, Janet L. Neilson, Hayley Newell, Haruna Okabe, Marilia Olio, Christian D. Ortega-Ortiz, Adam A. Pack, Daniel M. Palacios, Heidi Pearson, Ester Quintana-Rizzo, Raul Ramirez Barragan, Nicola Ransome, Hiram Rosales-Nanduca, Fred Sharpe, Tasli Shaw, Ken Southerland, Stephanie Stack, Iain Staniland, Janice Straley, Andrew Szabo, Suzie Teerlink, Olga Titova, Jorge Urban-Ramirez, Martin van Aswegen, Marcel Vinicius, Olga von Ziegesar, Briana Witteveen, Janie Wray, Kymberly Yano, Igor Yegin, Denny Zwiefelhofer, and Phil Clapham Royal Society Open Science 11(2):231462 (19 p.)
2024Cheeseman
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Tracked gulls help identify potential zones of interaction between whales and shipping traffic

Cimino, Megan A., Heather Welch, Jarrod A. Santora, David Kroodsma, Elliott L. Hazen, Steven J. Bograd, Pete Warzybok, Jaime Jahncke, and Scott A. Shaffer
2024
Marine Ornithology 52(1):61-72
Tracked gulls help identify potential zones of interaction between whales and shipping traffic Cimino, Megan A., Heather Welch, Jarrod A. Santora, David Kroodsma, Elliott L. Hazen, Steven J. Bograd, Pete Warzybok, Jaime Jahncke, and Scott A. Shaffer Marine Ornithology 52(1):61-72
2024Cimino
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Restoring freshwater habitat mosaics to promote resilience of vulnerable salmon populations

Cordoleani, Flora, Corey C. Phillis, Anna M. Sturrock, Malte Willmes, George Whitman, Eric Holmes, Peter K. Weber, Carson Jeffres, and Rachel C. Johnson
2024
Ecosphere 15(3):e4803 (18 p.)
https://doi.org/10.1002/ecs2.4803
Restoring freshwater habitat mosaics to promote resilience of vulnerable salmon populations Cordoleani, Flora, Corey C. Phillis, Anna M. Sturrock, Malte Willmes, George Whitman, Eric Holmes, Peter K. Weber, Carson Jeffres, and Rachel C. Johnson Ecosphere 15(3):e4803 (18 p.)
2024Cordoleani
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The effects of the Affordable Care Act's insurance subsidies on a commercial fishing fleet

Crosson, Scott, Cameron Speir, and Christina Wiegand
2024
Marine Resource Economics 39(1):61-71
https://doi.org/10.1086/727574
The effects of the Affordable Care Act's insurance subsidies on a commercial fishing fleet Crosson, Scott, Cameron Speir, and Christina Wiegand Marine Resource Economics 39(1):61-71
2024Crosson
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Sea-ice and macrozooplankton distribution as determinants of top predator community structure in Antarctic winter

Czapanskiy, Max F., Jarrod A. Santora, Kimberly S. Dietrich, Megan A. Cimino, Elliott L. Hazen, Christian S. Reiss, and Richard R. Veit
2024
Marine Ecology Progress Series 738:57-73
https://doi.org/10.3354/meps14609
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Dealy, Donna D., James R. Hilger, and Stephen M. Stohs
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-697. 205 p.
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1
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Population assignment from genotype likelihoods for low-coverage whole-genome sequencing data

DeSaix, Matthew G., Marina D. Rodriguez, Kristen C. Ruegg, and Eric C. Anderson
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Methods in Ecology and Evolution 15(3):493-510
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Deser, Clara, Adam S. Phillips, Michael A. Alexander, Dillon J. Amaya, Antonietta Capotondi, Michael G. Jacox, and James D. Scott
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Journal of Climate 37(6):1877-1902
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An update of egg escapement, fishing mortality, and spawning stock biomass for the California market squid (Doryteuthis opalescens) fishery from 1999 to 2022

Dorval, Emmanis, Dianna Porzio, and Katie Grady
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-701. 33 p.
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An update of egg escapement, fishing mortality, and spawning stock biomass for the California market squid (Doryteuthis opalescens) fishery from 1999 to 2022 Dorval, Emmanis, Dianna Porzio, and Katie Grady U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-701. 33 p.
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Dorval, Emmanis, Kirk Lynn, Dianna Porzio, Trung Nguyen, and Katie Grady
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Fisheries Research 274:106999 (16 p.)
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Eguchi, Tomo, Aimee Lang, and David Weller
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-695. 10 p.
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Thermal optima in the hypoxia tolerance of marine ectotherms: Physiological causes and biogeographic consequences

Endress, Martin-Georg A., Justin L. Penn, Thomas H. Boag, Benjamin P. Burford, Erik A. Sperling, and Curtis A. Deutsch
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Fahlbusch, James A., David E. Cade, Elliott L. Hazen, Meredity L. Elliott, Benjamin T. Saenz, Jeremy A. Goldbogen, and Jaime Jahncke
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Fennie, H. William, Noah Ben-Aderet, Steven J. Bograd, Garfield T. Kwan, Jarrod A. Santora, Isaac D. Schroeder, and Andrew R. Thompson
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Flannery, Corianna, and Eric P. Bjorkstedt
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Dynamic human, oceanographic, and ecological factors mediate transboundary fishery overlap across the Pacific high seas

Frawley, Timothy H., Barbara Muhling, Stephanie Brodie, Hannah Blondin, Heather Welch, Martin C. Arostegui, Steven J. Bograd, Camrin D. Braun, Megan A. Cimino, Nima Farchadi, Elliott L. Hazen, Desiree Tommasi, and Michael Jacox
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Fish and Fisheries 25(1):60-81
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0
0

Self-governance mediates small-scale fishing strategies, vulnerability and adaptive response

Frawley, Timothy H., Blanca Gonzalez-Mon, Mateja Nenadovic, Fiona Gladstone, Keiko Nomura, Jose Alberto Zepeda-Dominguez, Salvador Rodriguez-Van Dyck, Erica M. Ferrer, Jorge Torre, Fiorenza Micheli, Heather M. Leslie, and Xavier Basurto
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Diet composition of juvenile green turtles in the Southwestern Atlantic Ocean: long-term insights from a beach stranding program

Gama, Luciana R., Jeffrey A. Seminoff, Garrett E. Lemons, Mariana M.P.B. Fuentes, Franciane Pellizzari, Mario R.C. Meira-Filho, Liana Rosa, Gabriela M. Velez-Rubio, Estevan Luis da Silveira, and Camila Domit
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1

Eastern North Pacific gray whales migrating north off the central California coast: A photo-identification catalog of mother-calf pairs 2012-2019

Gilpatrick, James W. Jr., Chelsea Parrish, Alexa K. Kownacki, Morgan S. Lynn, Wayne L. Perryman, and David W. Weller
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-693. 201 p.
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Trait-based indicators of resource selection by albacore tuna in the California Current Large Marine Ecosystem

Gleiber, Miram R., Natasha A. Hardy, Caitlin J. Morganson, Catherine F. Nickels, Barbara A. Muhling, Elan J. Portner, Brian K. Wells, Richard D. Brodeur, Toby D. Auth, Jarrod A. Santora, Sarah M. Glaser, Daniel J. Madigan, Elliott L. Hazen, Larry B. Crowder, and Stephanie J. Green
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Goetz, Laura C., Hayley Nuetzel, David L.J. Vendrami, Anne K. Beulke, Eric C. Anderson, John Carlos Garza, and Devon E. Pearse
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Genetic parentage reveals the (un)natural history of Central Valley hatchery steelhead Goetz, Laura C., Hayley Nuetzel, David L.J. Vendrami, Anne K. Beulke, Eric C. Anderson, John Carlos Garza, and Devon E. Pearse Evolutionary Applications 17(3):e13681 (15 p.)
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Archived DNA reveals marine heatwave-associated shifts in fish assemblages

Gold, Zachary, Ryan P. Kelly, Andrew Olaf Shelton, Andrew R. Thompson, Kelly D. Goodwin, Ramon Gallego, Kim M. Parsons, Luke R. Thompson, Dovi Kacev, Paul H. Barber
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Archived DNA reveals marine heatwave-associated shifts in fish assemblages Gold, Zachary, Ryan P. Kelly, Andrew Olaf Shelton, Andrew R. Thompson, Kelly D. Goodwin, Ramon Gallego, Kim M. Parsons, Luke R. Thompson, Dovi Kacev, Paul H. Barber Environmental DNA 6(1):e400 (14 p.)
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An updated end-to-end ecosystem model of the Northern California Current reflecting ecosystem changes due to recent marine heatwaves

Gomes, Dylan G.E., James J. Ruzicka, Lisa G. Crozier, David D. Huff, Elizabeth M Phillips, Pierre-Yves Hernvann, Cheryl A. Morgan, Richard D. Brodeur, Jen E. Zamon, Elizabeth A. Daly, Joseph J. Bizzarro, Jennifer L. Fisher, and Toby D. Auth
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Spatio-temporal distributions, abundance, and overlap between sablefish (Anoplopoma fimbria) and commander squid (Berryteuthis magister) in the Eastern Bering Sea Slope

Gonzalez, Martin A., Caitlin I. Allen Akselrud, and Cecilia A. O'Leary
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-699. 24 p.
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Spatio-temporal distributions, abundance, and overlap between sablefish (Anoplopoma fimbria) and commander squid (Berryteuthis magister) in the Eastern Bering Sea Slope Gonzalez, Martin A., Caitlin I. Allen Akselrud, and Cecilia A. O'Leary U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-699. 24 p.
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Pop-up satellite archival tags and an individual-based model provide new insights on behavioural thermoregulation in migrating ovigerous American lobster

Hanley, Patricia H., Eric P. Bjorkstedt, Bryan L. Morse, and Remy Rochette
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Ecological Modelling 489:110607 (12 p.)
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0

Trait-based analyses reveal global patterns in diverse diets of albacore tuna (Thunnus alalunga)

Hardy, Natasha A., Cindy Matuch, Zachary Roote, Iris George, Barbara A. Muhling, Michael G. Jacox, Elliott L. Hazen, Steven J. Bograd, Larry B. Crowder, and Stephanie J. Green
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Fish and Fisheries 25(2):268-282
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Trait-based analyses reveal global patterns in diverse diets of albacore tuna (Thunnus alalunga) Hardy, Natasha A., Cindy Matuch, Zachary Roote, Iris George, Barbara A. Muhling, Michael G. Jacox, Elliott L. Hazen, Steven J. Bograd, Larry B. Crowder, and Stephanie J. Green Fish and Fisheries 25(2):268-282
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1
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0

Life cycle modeling framework for Chinook salmon spawning in the Sacramento River

Hendrix, Noble, Ann-Marie K. Osterback, Sara John, Miles Daniels, Eva Dusek Jennings, Eric Danner, and Steve Lindley
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-696. 42 p.
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Life cycle modeling framework for Chinook salmon spawning in the Sacramento River Hendrix, Noble, Ann-Marie K. Osterback, Sara John, Miles Daniels, Eva Dusek Jennings, Eric Danner, and Steve Lindley U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-696. 42 p.
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Huber, Eric R., Rachael E. Ryan, Rachel C. Johnson, Anna M. Sturrock, Robert A. Lusardi, and Stephanie M. Carlson
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Canadian Journal of Fisheries and Aquatic Sciences 81(4):355-367
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Seventy years of diminishing biocomplexity of California Central Valley hatchery steelhead, Oncorhynchus mykiss Huber, Eric R., Rachael E. Ryan, Rachel C. Johnson, Anna M. Sturrock, Robert A. Lusardi, and Stephanie M. Carlson Canadian Journal of Fisheries and Aquatic Sciences 81(4):355-367
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0

Validation of periodicity of growth band formation in Pacific Sardine (Sardinops sagax) from a captive growth experiment

James, Kelsey C., Emmanis Dorval, and Brad E. Erisman
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Marine Biology 171(5):105 (13 p.)
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Participation in collaborative fisheries research improves the perceptions of recreational anglers towards marine protected areas

Johnston, Erin M., Grant T. Waltz, Rosamaria Kosaka, Ellie M. Brauer, Shelby L. Ziegler, Erica T. Jarvis Mason, Hunter S. Glanz, Lauren Zaragoza, Allison N. Kellum, Rachel O. Brooks, Brice X. Semmens, Christopher J. Honeyman, Jennifer E. Caselle, Lyall F. Bellquist, Sadie L. Small, Steven G. Morgan, Timothy J. Mulligan, Connor L. Coscino, Jay M. Staton, Richard M. Starr, Scott L. Hamilton, Benjamin I Ruttenberg, and Dean E. Wendt
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Participation in collaborative fisheries research improves the perceptions of recreational anglers towards marine protected areas Johnston, Erin M., Grant T. Waltz, Rosamaria Kosaka, Ellie M. Brauer, Shelby L. Ziegler, Erica T. Jarvis Mason, Hunter S. Glanz, Lauren Zaragoza, Allison N. Kellum, Rachel O. Brooks, Brice X. Semmens, Christopher J. Honeyman, Jennifer E. Caselle, Lyall F. Bellquist, Sadie L. Small, Steven G. Morgan, Timothy J. Mulligan, Connor L. Coscino, Jay M. Staton, Richard M. Starr, Scott L. Hamilton, Benjamin I Ruttenberg, and Dean E. Wendt Frontiers in Marine Science 11:1330498 (12 p.)
2024Johnston
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0

Otolith microchemistry combined with genetics reveal patterns of straying and population connectivity in anadromous brown trout (Salmo trutta)

Kallo, Kristi, Kim Birnie-Gauvin, Henrik Baktoft, Dorte Bekkevold, Charles Lesher, Peter Gronkjaer, Gry H. Barfod, Rachel Johnson, George Whitman, Malte Willmes, Justin Glessner, and Kim Aarestrup
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0

Evaluating threats to South Shetland Antarctic fur seals amidst population collapse

Krause, Douglas J., Robert L. Brownell Jr., Carolina A. Bonin, Samuel M. Woodman, Douglas Shaftel, and George M. Watters
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Mammal Review 54(1):30-46
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0
1
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0
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1

Assessment of the Pacific sardine resource (Sardinops sagax) in 2024 for U.S. management in 2024-2025

Kuriyama, Peter T., Caitlin Allen Akselrud, Juan P. Zwolinski, and Kevin T. Hill
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-698. 165 p.
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1
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1
0
0

Good practices for estimating and using length-at-age in integrated stock assessments

Lee, HuiHua, Mark N. Maunder, and Kevin R. Piner
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Fisheries Research 270:106883
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0
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0

Evaluating the potential for efficient, UAS-based reach-scale mapping of river channel bathymetry from multispectral images

Legleiter, Carl J., and Lee R. Harrison
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Frontiers in Remote Sensing 5:1305991 (16 p.)
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0

Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers

Lennox, Robert J., Frederick G. Whoriskey, Pieterjan Verhelst, Christopher S. Vandergoot, Marc Soria, Jan Reubens, Erin L. Rechisky, Michael Power, Taryn Murray, Ingeborg Mulder, James L. Markham, Susan K. Lowerre-Barbieri, Steven T. Lindley, Nathan A. Knott, Steven T. Kessel, Sara Iverson, Charlie Huveneers, Maike Heidemeyer, Robert Harcourt, Lucas P. Griffin, Claudie Friess, Alexander Filous, Lachlan C. Fetterplace, Andy J. Danylchuk, Ryan Daly, Paul Cowley, Steven J. Cooke, Elpis J. Chavez, Antonin Blaison, and Kim Whoriskey
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Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers Lennox, Robert J., Frederick G. Whoriskey, Pieterjan Verhelst, Christopher S. Vandergoot, Marc Soria, Jan Reubens, Erin L. Rechisky, Michael Power, Taryn Murray, Ingeborg Mulder, James L. Markham, Susan K. Lowerre-Barbieri, Steven T. Lindley, Nathan A. Knott, Steven T. Kessel, Sara Iverson, Charlie Huveneers, Maike Heidemeyer, Robert Harcourt, Lucas P. Griffin, Claudie Friess, Alexander Filous, Lachlan C. Fetterplace, Andy J. Danylchuk, Ryan Daly, Paul Cowley, Steven J. Cooke, Elpis J. Chavez, Antonin Blaison, and Kim Whoriskey Ecography 2024(1):e06801 (16 p.)
2024Lennox
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0
0

Divergent responses of highly migratory species to climate change in the California Current

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1

Genetic data reveal wintering ground affiliation of humpback whales from the Mexican Central Pacific

Llamas-Gonzalez, Myriam, Christian D. Ortega-Ortiz, Luis M. Enriquez-Paredes, Ursula A. Gonzalez-Peral, Eric Bautista-Guerrero, and Karen K. Martien
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Marine Mammal Science 40(1):54-72
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0
0
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0
0
1

Smaller body size under warming is not due to gill-oxygen limitation in a cold-water salmonid

Lonthair, Joshua K., Nicholas C. Wegner, Brian S. Cheng, Nann A. Fangue, Matthew J. O'Donnell, Amy M. Regish, John D. Swenson, Estefany Argueta, Stephen D. McCormick, Benjamin H. Letcher, and Lisa M. Komoroske
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Martien, Karen K., Marie C. Hill, Frederick I. Archer, Robin W. Baird, Andrea R. Bendlin, Louella Dolar, Allan D. Ligon, Erin M. Oleson, Kelly M. Robertson, Samuel M. Woodman, Adam C. U, Kymberly M. Yano, and Amanda L. Bradford
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Frontiers in Marine Science 10:1254959 (18 p.)
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Aquatic Mammals 50(2):93-106
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-189. 150 p.
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Oecologia 204(3):543-557
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Olson, Paula A., and Douglas Kinzey
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Development of methods for collecting spectral data from Fourier transform near-infrared spectroscopy to age three small coastal pelagic species (Pacific Sardine, Pacific Mackerel, Northern Anchovy) in the northeast Pacific Ocean

Saas, Emma, Emmanis Dorval, Dianna L. Porzio, and Brittany D. Schwartzkopf
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-694. 47 p.
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Comparison of environmental DNA and underwater visual count surveys for detecting juvenile Coho Salmon in small rivers

Shaffer, Jason T., Andrew P. Kinziger, Eric P. Bjorkstedt, and Andre Buchheister
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North American Journal of Fisheries Management 44(2):449-462
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Spirochaete genome identified in red abalone sample represents a novel genus Candidatus Haliotispira gen. nov. within the order Spirochaetales

Sharma, Sharu Paul, Catherine M. Purcell, John R. Hyde, and Andrew J. Severin
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International Journal of Systematic and Evolutionary Microbiology 74:006198 (8 p.)
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Skelton, Zachary R., Lillian R. McCormick, Garfield T. Kwan, Joshua Lonthair, Carlos Neira, Samantha M. Clements, Todd R. Martz, Philip J. Bresnahan, Uwe Send, Sarah N. Giddings, Jeffrey C. Sevadjian, Stephanie Jaeger, Adriano Feit, Benjamin W. Frable, Phillip J. Zerofski, Melissa Torres, Jeffrey A. Crooks, Justin McCullough, Melissa L. Carter, Eva Ternon, Luke P. Miller, Gabriella M. Kalbach, Duncan C. Wheeler, P. Ed Parnell, Katherine M. Swiney, Garrett Seibert, Jeremiah J. Minich, John R. Hyde, Philip A. Hastings, Jennifer E. Smith, Lisa M. Komoroske, Martin Tresguerres, Lisa A. Levin, and Nicholas C. Wegner
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Insights into vertebral band pair deposition rate in the juvenile common thresher shark (Alopias vulpinus) in the northeastern Pacific Ocean

Spear, Luka N., Suzanne Kohin, John A. Mohan, and R.J. David Wells
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Journal of Fish Biology 104(1):104-112
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Connecting thiamine availability to the microbial community composition in Chinook salmon spawning habitats of the Sacramento River basin

Suffridge, Christopher P., Kelly C. Shannon, H. Matthews, R.C. Johnson, C. Jeffres, N. Mantua, A.E. Ward, E. Holmes, J. Kindopp, M. Aldoo, and F.S. Colwell
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Applied and Environmental Microbiology 90(1):e01760-23 (26 p.)
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Thompson, Andrew R., Rasmus Swalethorp, Michaela Alksne, Jarrod A. Santora, Elliott L. Hazen, Andrew Leising, Erin Satterthwaite, William J. Sydeman, Clarissa R. Anderson, Toby D. Auth, Simone Baumann-Pickering, Timothy Baumgardner, Eric P. Bjorkstedt, Steven J. Bograd, Noelle M. Bowlin, Brian J. Burke, Elizabeth A. Daly, Heidi Dewar, John C. Field, Jennifer L. Fisher, Newell Garfield, Ashlyn Gidding, Ralf Goericke, Richard Golightly, Eliana Gomez-Ocampo, Jose Gomez-Valdes, John A. Hildebrand, Kym C. Jacobson, Michael G. Jacox, Jaime Jahncke, Michael Johns, Joshua M. Jones, Bertha Lavaniegos, Nate Mantua, Gerard J. McChesney, Megan E. Medina, Sharon R. Melin, Luis Erasmo Miranda, Cheryl A. Morgan, Catherine F. Nickels, Rachael A. Orben, Jessica M. Porquez, Antonella Preti, Roxanne R. Robertson, Daniel L. Rudnick, Keith M. Sakuma, Carley R. Schacter, Isaac D. Schroeder, Lauren Scopel, Owyn E. Snodgrass, Sarah Ann Thompson, Pete Warzybok, Katherine Whitaker, William Watson, Edward D. Weber, and Brian Wells
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Frontiers in Marine Science 11:1294011 (21 p.)
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Size-selective predation effects on juvenile Chinook salmon cohort survival off Central California evaluated with an individual-based model

Vasbinder, Kelly, Jerome Fiechter, Jarrod A. Santora, James J. Anderson, Nate Mantua, Steve T. Lindley, David D. Huff, and Brian K. Wells
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Fisheries Oceanography 33(1):e12654 (15 p.)
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Vaudo, Jeremy J., Heidi Dewar, Michael E. Byrne, Bradley M. Wetherbee, and Mahmood S. Shivji
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Marine Ecology Progress Series 732:85-99
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