NOAA FISHERIES

Expanded, compressed, or equal? Interactions between spawning window and stream thermal regime generate three responses in modeled juvenile emergence for Pacific salmon Adelfio, Luca, Steve Wondzell, Nate Mantua, and Gordon Reeves Canadian Journal of Aquatic and Fishery Science

Seventy years of diminishing biocomplexity of California Central Valley hatchery steelhead, Oncorhynchus mykiss Huber, Eric R., Rachel E. Ryan, Rachel C. Johnson, Anna M. Sturrock, Robert A. Lusardi, and Stephanie M. Carlson Canadian Journal of Fisheries and Aquatic Sciences

Empirical dynamic programming for model-free ecosystem-based management Munch, Stephan B., and Antoine Brias Methods in Ecology and Evolution

Environmental drivers of biogeography and community structure in a Mid-Atlantic estuary Oleynik, Haley, Joseph Bizzarro, Edward Hale, and Aaron Carlisle Oecologia

Evaluating top-down, bottom-up, and environmental drivers of pelagic food web dynamics along an estuarine gradient Rogers, Tanya L., Samuel M. Bashevkin, Christina E. Burdi, Denise D. Colombano, Peter N. Dudley, Brian Mahardja, Lara Mitchell, Sarah Perry, and Parsa Saffarinia Ecology

Comparison of environmental DNA and underwater visual count surveys for detecting juvenile Coho Salmon in small rivers Shaffer, Jason T., Andrew P. Kinziger, Eric P. Bjorkstedt, and Andre Buchheister North American Journal of Fisheries Management

Trophoscapes of predatory fish reveal biogeographic structuring of spatial dietary overlap and inform fisheries bycatch patterns Wells, Brian K., Jarrod A. Santora, Joseph J. Bizzarro, Alicia Billings, Richard E. Brodeur, Elizabeth A. Daly, John C. Field, Kate E. Richerson, and James T. Thorson Marine Ecology Progress Series

Forensic geochemistry identifies the illegal introduction of Walleye into Lake Cascade, Idaho Whitman, George, Jordan Messner, Rachel C. Johnson, Malte Willmes, Brian P. Kennedy, and Carson Jeffres North American Journal of Fisheries Management

Reproductive plasticity in long-lived rockfish (Sebastes spp.) in response to environmental shifts in the California Current Ecosystem Beyer, Sabrina, Susan Sogard, David Stafford, Neosha Kashef, Abel Rodriguez, Suzanne Alonzo, and John Field Canadian Journal of Fisheries and Aquatic Sciences

Genetic parentage reveals the (un)natural history of Central Valley hatchery steelhead Goetz, Laura C., Hayley Nuetzel, David I.J. Vendrami, Anne K. Beulke, Eric C. Anderson, John Carlos Garza, and Devon E. Pearse Evolutionary Applications

Evaluating the potential for efficient, UAS-based reach-scale mapping of river channel bathymetry from multispectral images Legleiter, Carl J., and Lee R. Harrison Frontiers in Remote Sensing

NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Watters, Diana (ed.), Joe Bizzarro, E.J. Dick, John Field, Tom Laidig, Melissa Monk, Nick Wegner, and William Watson In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Annual meeting of the TSC (2024). Pacific States Marine Fisheries Commission.

Variability in coastal habitat available for Longfin Smelt Spirinchus thaleichthys in the northeastern Pacific Ocean Young, Matthew J., Frederick Feyrer, Steven Lindley, and David D. Huff Frontiers in Marine Science

Tracked gulls help identify potential zones of interaction between whales and shipping traffic Cimino, Megan A., Heather Welch, Jarrod A. Santora, David Kroodsma, Elliott L. Hazen, Steven J. Bograd, Pete Warzybok, Jaime Jahncke, and Scott A. Shaffer Marine Ornithology 52(1):61-72

Restoring freshwater habitat mosaics to promote resilience of vulnerable salmon populations Cordoleani, Flora, Corey C. Phillis, Anna M. Sturrock, Malte Willmes, George Whitman, Eric Holmes, Peter K. Weber, Carson Jeffres, and Rachel C. Johnson Ecosphere 15(3):e4803 (18 p.)

The effects of the Affordable Care Act's insurance subsidies on a commercial fishing fleet Crosson, Scott, Cameron Speir, and Christina Wiegand Marine Resource Economics 39(1):61-71

Population assignment from genotype likelihoods for low-coverage whole-genome sequencing data DeSaix, Matthew G., Marina D. Rodriguez, Kristen C. Ruegg, and Eric C. Anderson Methods in Ecology and Evolution 15(3):493-510

Thermal optima in the hypoxia tolerance of marine ectotherms: Physiological causes and biogeographic consequences Endress, Martin-Georg A., Justin L. Penn, Thomas H. Boag, Benjamin P. Burford, Erik A. Sperling, and Curtis A. Deutsch PLoS Biology 22(1):e3002443 (17 p.)

Momma's larvae: Maternal oceanographic experience and larval size influence early survival of rockfishes Fennie, H. William, Noah Ben-Aderet, Steven J. Bograd, Garfield T. Kwan, Jarrod A. Santora, Isaac D. Schroeder, and Andrew R. Thompson Fisheries Oceanography 33(2):e12658 (18 p.)

Critical swimming speed of juvenile rockfishes (Sebastes) following long- and short-term exposures to acidification and deoxygenation Flannery, Corianna, and Eric P. Bjorkstedt Journal of Experimental Marine Biology and Ecology 573:151993 (14 p.)

Trait-based indicators of resource selection by albacore tuna in the California Current Large Marine Ecosystem Gleiber, Miram R., Natasha A. Hardy, Caitlin J. Morganson, Catherine F. Nickels, Barbara A. Muhling, Elan J. Portner, Brian K. Wells, Richard D. Brodeur, Toby D. Auth, Jarrod A. Santora, Sarah M. Glaser, Daniel J. Madigan, Elliott L. Hazen, Larry B. Crowder, and Stephanie J. Green Ecological Indicators 158:111473 (16 p.)

An updated end-to-end ecosystem model of the Northern California Current reflecting ecosystem changes due to recent marine heatwaves Gomes, Dylan G.E., James J. Ruzicka, Lisa G. Crozier, David D. Huff, Elizabeth M Phillips, Pierre-Yves Hernvann, Cheryl A. Morgan, Richard D. Brodeur, Jen E. Zamon, Elizabeth A. Daly, Joseph J. Bizzarro, Jennifer L. Fisher, and Toby D. Auth PLoS ONE 19(1):e0280366 (42 p.)

Pop-up satellite archival tags and an individual-based model provide new insights on behavioural thermoregulation in migrating ovigerous American lobster Hanley, Patricia H., Eric P. Bjorkstedt, Bryan L. Morse, and Remy Rochette Ecological Modelling 489:110607 (12 p.)

Life cycle modeling framework for Chinook salmon spawning in the Sacramento River Hendrix, Noble, Ann-Marie K. Osterback, Sara John, Miles Daniels, Eva Dusek Jennings, Eric Danner, and Steve Lindley U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-696. 42 p.

Participation in collaborative fisheries research improves the perceptions of recreational anglers towards marine protected areas Johnston, Erin M., Grant T. Waltz, Rosamaria Kosaka, Ellie M. Brauer, Shelby L. Ziegler, Erica T. Jarvis Mason, Hunter S. Glanz, Lauren Zaragoza, Allison N. Kellum, Rachel O. Brooks, Brice X. Semmens, Christopher J. Honeyman, Jennifer E. Caselle, Lyall F. Bellquist, Sadie L. Small, Steven G. Morgan, Timothy J. Mulligan, Connor L. Coscino, Jay M. Staton, Richard M. Starr, Scott L. Hamilton, Benjamin I Ruttenberg, and Dean E. Wendt Frontiers in Marine Science 11:1330498 (12 p.)

Otolith microchemistry combined with genetics reveal patterns of straying and population connectivity in anadromous brown trout (Salmo trutta) Kallo, Kristi, Kim Birnie-Gauvin, Henrik Baktoft, Dorte Bekkevold, Charles Lesher, Peter Gronkjaer, Gry H. Barfod, Rachel Johnson, George Whitman, Malte Willmes, Justin Glessner, and Kim Aarestrup Ecology of Freshwater Fish 33(2):e12760 (13 p.)

Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers Lennox, Robert J., Frederick G. Whoriskey, Pieterjan Verhelst, Christopher S. Vandergoot, Marc Soria, Jan Reubens, Erin L. Rechisky, Michael Power, Taryn Murray, Ingeborg Mulder, James L. Markham, Susan K. Lowerre-Barbieri, Steven T. Lindley, Nathan A. Knott, Steven T. Kessel, Sara Iverson, Charlie Huveneers, Maike Heidemeyer, Robert Harcourt, Lucas P. Griffin, Claudie Friess, Alexander Filous, Lachlan C. Fetterplace, Andy J. Danylchuk, Ryan Daly, Paul Cowley, Steven J. Cooke, Elpis J. Chavez, Antonin Blaison, and Kim Whoriskey Ecography 2024(1):e06801 (16 p.)

Development and application of a bioenergetics growth model for multiple early life stages of an ecologically important marine fish Morales, Mark M., Jerome Fiechter, John C. Field, Neosha S. Kashef, Elliott L. Hazen, and Mark H. Carr Ecological Modelling 488:110575 (17 p.)

Biological status of Oregon Coast and Southern Oregon/Northern California coastal Chinook salmon: Report of the Status Review Team NOAA Fisheries Oregon Coast and Southern Oregon/Northern California Coastal Chinook Salmon Status Review Team U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-189. 150 p.

Connecting thiamine availability to the microbial community composition in Chinook salmon spawning habitats of the Sacramento River basin Suffridge, Christopher P., Kelly C. Shannon, H. Matthews, R.C. Johnson, C. Jeffres, N. Mantua, A.E. Ward, E. Holmes, J. Kindopp, M. Aldoo, and F.S. Colwell Applied and Environmental Microbiology 90(1):e01760-23 (26 p.)

State of the California Current Ecosystem report in 2022: a tale of two La Ninas Thompson, Andrew R., Rasmus Swalethorp, Michaela Alksne, Jarrod A. Santora, Elliott L. Hazen, Andrew Leising, Erin Satterthwaite, William J. Sydeman, Clarissa R. Anderson, Toby D. Auth, Simone Baumann-Pickering, Timothy Baumgardner, Eric P. Bjorkstedt, Steven J. Bograd, Noelle M. Bowlin, Brian J. Burke, Elizabeth A. Daly, Heidi Dewar, John C. Field, Jennifer L. Fisher, Newell Garfield, Ashlyn Gidding, Ralf Goericke, Richard Golightly, Eliana Gomez-Ocampo, Jose Gomez-Valdes, John A. Hildebrand, Kym C. Jacobson, Michael G. Jacox, Jaime Jahncke, Michael Johns, Joshua M. Jones, Bertha Lavaniegos, Nate Mantua, Gerard J. McChesney, Megan E. Medina, Sharon R. Melin, Luis Erasmo Miranda, Cheryl A. Morgan, Catherine F. Nickels, Rachael A. Orben, Jessica M. Porquez, Antonella Preti, Roxanne R. Robertson, Daniel L. Rudnick, Keith M. Sakuma, Carley R. Schacter, Isaac D. Schroeder, Lauren Scopel, Owyn E. Snodgrass, Sarah Ann Thompson, Pete Warzybok, Katherine Whitaker, William Watson, Edward D. Weber, and Brian Wells Frontiers in Marine Science 11:1294011 (21 p.)

Size-selective predation effects on juvenile Chinook salmon cohort survival off Central California evaluated with an individual-based model Vasbinder, Kelly, Jerome Fiechter, Jarrod A. Santora, James J. Anderson, Nate Mantua, Steve T. Lindley, David D. Huff, and Brian K. Wells Fisheries Oceanography 33(1):e12654 (15 p.)

Evolutionary history influences the microbiomes of a female symbiotic reproductive organ in cephalopods Vijayan, Nidhi, Sarah J. McAnulty, Gustavo Sanchez, Jeffrey Jolly, Yuzuru Ikeda, Michele K. Nishiguchi, Elodie Reveillac, Camino Gestal, Blake L. Spady, Diana H. Li, Benjamin P. Burford, Allison H. Kerwin, and Spencer V. Nyholm Applied and Environmental Microbiology 90(3):e00990-23 (19 p.)

Predicting spring phenology in deciduous broadleaf forests: NEON phenology forecasting community challenge Wheeler, Kathryn I., Michael C. Dietze, David LeBauer, Jody A. Peters, Andrew D. Richardson, Arun A. Ross, R. Quinn Thomas, Kai Zhu, Uttam Bhat, Stephan Munch, Raphaela Floreani Buzbee, Min Chen, Benjamin Goldstein, Jessica Guo, Dalei Hao, Chris Jones, Mira Kelly-Fair, Haoran Liu, Charlotte Malmborg, Naresh Neupane, Debasmita Pal, Vaughn Shirey, Yiluan Song, McKalee Steen, Eric A. Vance, Whitney M. Woelmer, Jacob H. Wynne, and Luke Zachmann Agricultural and Forest Meteorology 345:109810 (12 p.)

Responses to pathogen exposure in sentinel juvenile fall-run Chinook salmon in the Sacramento River, CA Abdelrazek, Samah M.R., Richard E. Connon, Camilo Sanchez, Benjamin Atencio, Florian Mauduit, Brendan Lehman, Sascha L. Hallett, Stephen D. Atkinson, J. Scott Foott, and Miles E. Daniels Conservation Physiology 11(1):coad066 (13 p.)

Trends in Chinook salmon spawner abundance and total run size highlight linkages between life history, geography and decline Atlas, William I., Matthew R. Sloat, William H. Satterthwaite, Thomas W. Buehrens, Charles K. Parken, Jonathan W. Moore, Nathan J. Mantua, Jon Hart, and Anna Potapova Fish and Fisheries 24(4):595-617

Highly accurate species identification of Eastern Pacific rockfishes (Sebastes spp.) with high-throughput DNA sequencing Baetscher, Diana S., Hayley M. Nuetzel, and John Carlos Garza Conservation Genetics 24(5):563-574

Fin-spine microchemistry discriminates regional stocks of Caspian Sea starry sturgeon Bakhshalizadeh, Shima, Botagoz Murasovna Nasibulina, Tatyana Fedorovna Kurochkin, Attaala Muhaysin Ali, and Theodore W. Hermann Estuarine, Coastal and Shelf Science 292:108483 (8 p.)

Laser ablation strontium isotopes and spatial assignment show seasonal mobility in red deer (Cervus elaphus) at Lazaret Cave, France (MIS 6) Barakat, Sarah, Mael Le Corre, Malte Willmes, Jessica Cohen, Manon Vuillien, Emmanuel Desclaux, and Kate Britton Frontiers in Ecology and Evolution 11:988837 (14 p.)

Genetic and environmental drivers of migratory behavior in western burrowing owls and implications for conservation and management Barr, Kelly, Christen M. Bossu, Rachael A. Bay, Eric C. Anderson, Jim Belthoff, Lynne A. Trulio, Debra Chromczak, Colleen L. Wisinski, Thomas B. Smith, and Kristen C. Ruegg Evolutionary Applications 16(12):1889-1900

Deconstructing dams and disease: predictions for salmon disease risk following Klamath River dam removals Bartholomew, Jerri L., Julie D. Alexander, Justin Alvarez, Stephen D. Atkinson, Michael Belchik, Sarah J. Bjork, J. Scott Foott, Alex Gonyaw, Mark E. Hereford, Richard A. Holt, Barry McCovey Jr., Nicholas A. Som, Toz Soto, Anne Voss, Thomas H. Williams, Ted G. Wise, and Sascha L. Hallett Frontiers in Ecology and Evolution 11:1245967 (24 p.)

Distinct patterns of inheritance shape life-history traits in steelhead trout Beulke, Anne K., Alicia Abadia-Cardoso, Devon E. Pearse, Laura C. Goetz, Neil F. Thompson, Eric C. Anderson, and John Carlos Garza Molecular Ecology 32(24):6896-6912

A Field Guide to the Fishes of the Salish Sea is a portable work of art: Theodore W. Pietsch, James W. Orr (illustrated by Joseph R. Tomelleri), A field guide to the fishes of the Salish Sea: Puget Sound and the straits of Georgia and Juan de Fuca, Washington State and British Columbia. Chatwin Books, 2023 [book review] Bizzarro, Joseph J. Environmental Biology of Fishes 106(12):2219-2221

Trophic guilds of marine predators in the California Current Large Marine Ecosystem Bizzarro, Joseph J., John C. Field, Jarrod A. Santora, K. Alexandra Curtis, and Brian K. Wells Frontiers in Marine Science 10:1195000 (21 p.)

A multi-predator trophic database for the California Current Large Marine Ecosystem Bizzarro, Joseph J., Lynn Dewitt, Brian K. Wells, K. Alexandra Curtis, Jarrod A. Santora, and John C. Field Scientific Data 10:496 (10 p.)

Natal contributions of kokanee salmon to Flaming Gorge Reservoir, Wyoming-Utah: An evaluation using otolith microchemistry Black, A.R., J.D. Walrath, M. Willmes, and M.C. Quist Journal of Fish and Wildlife Management 14(1):90-107

South-Central / Southern California Coast Recovery Domain Boughton, David A. In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 175-209. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Migrant steelhead passage after dam removal, river reroute, and channel evolution in the Carmel River, California Boughton, David A., Haley A. Ohms, and Cory Hamilton Report to California American Water and the California Coastal Office of the National Marine Fisheries Service, West Coast Region. U.S. Department of Commerce, NOAA Southwest Fisheries Science Center, Fisheries Ecology Division, Santa Cruz, California. 8 p.

Ecological forecasts for marine resource management during climate extremes Brodie, Stephanie, Mercedes Pozo Buil, Heather Welch, Steven J. Bograd, Elliott L. Hazen, Jarrod A. Santora, Rachel Seary, Isaac D. Schroeder, and Michael G. Jacox Nature Communications 14:7701 (10 p.)

Interactions between life history and the environment on changing growth rates of Chinook salmon Buckner, Jack H., William H. Satterthwaite, Benjamin W. Nelson, and Eric J. Ward Canadian Journal of Fisheries and Aquatic Sciences 80(4):648-662

Role of maturation and mortality in portfolio effects and climate resilience Carvalho, Paul G., William H. Satterthwaite, Michael R. O'Farrell, Cameron Speir, and Eric P. Palkovacs Canadian Journal of Fisheries and Aquatic Sciences 80(6):924-941

Age structure of natural versus hatchery-origin endangered Chinook salmon and implications for fisheries management in California Chen, Emily K., William H. Satterthwaite, Brett J. Kormos, Rachel C. Johnson, Corey C. Phillis, and Stephanie M. Carlson Marine Ecology Progress Series 723:37-55

A unifying framework for understanding ecological and evolutionary population connectivity Cramer, Alli N., Jennifer A. Hoey, Tara E. Dolan, Remy Gatins, Jason A. Troy, Jordan L. Chancellor, Eric P. Palkovacs, John Carlos Garza, and Roxanne S. Beltran Frontiers in Ecology and Evolution 11:1072825 (15 p.)

Development of a castable, GPS enabled, Miniaturized Predation Event Recorder (mPER) to quantify predation of juvenile fishes Demetras, Nicholas J., T. Reid Nelson, Brendan M. Lehman, and Cyril J. Michel Fisheries Research 264:106706 (7 p.)

Low-coverage whole genome sequencing for highly accurate population assignment: Mapping migratory connectivity in the American Redstart (Setophaga ruticilla) DeSaix, Matthew G., Eric C. Anderson, Christen M. Bossu, Christine E. Rayne, Teia M. Schweizer, Nicholas J. Bayly, Darshan S. Narang, Julie C. Hagelin, H. Lisle Gibbs, James F. Saracco, Thomas W. Sherry, Michael S. Webster, Thomas B. Smith, Peter P. Marra, and Kristen C. Ruegg Molecular Ecology 32(20):5528-5540

Age structure augments the predictive power of time series for fisheries and conservation Dolan, Tara E., Eric P. Palkovacs, Tanya L. Rogers, and Stephan B. Munch Canadian Journal of Fisheries and Aquatic Sciences 80(5):795-807

Environmental variability and krill abundance in the central California Current: Implications for ecosystem monitoring Dorman, Jeffrey G., William J. Sydeman, Sarah Ann Thompson, Joseph D. Warren, Helen J. Killeen, Brian A. Hoover, John C. Field, and Jarrod A. Santora Frontiers in Marine Science 10:1099482 (17 p.)

A meta-analysis and model comparison of juvenile salmon growth across different habitat types Dudley, Peter N., Albert Noble Hendrix, and Ann-Marie K. Osterback River Research and Applications 39(2):177-188

NOAA West Coast Deep-Sea Coral Initiative 2018-2021: Final report Duncan, Elizabeth, Caitlin Adams, Chris Caldow, Eric Chavez, Elizabeth Clarke, Heather Coleman, Meredith Everett, Tom Hourigan, Tom Laidig, Jenny Waddell, and Arliss Winship U.S. Department of Commerce, NOAA Technical Memorandum NMFS-OHC-12. 70 p.

Six years of fluvial response to a large dam removal on the Carmel River, California, USA East, Amy E., Lee R. Harrison, Douglas P. Smith, Joshua B. Logan, and Rosealea M. Bond Earth Surface Processes and Landforms 48(8):1487-1501

An anchovy ecosystem indicator of marine predator foraging and reproduction Fennie, H. William, Rachel Seary, Barbara A. Muhling, Steven J. Bograd, Stephanie Brodie, Megan A. Cimino, Elliott L. Hazen, Michael G. Jacox, Elizabeth A. McHuron, Sharon Melin, Jarrod A. Santora, Justin J. Suca, Julie A. Thayer, Andrew R. Thompson, Pete Warzybok, and Desiree Tommasi Proceedings of the Royal Society B 290(1992):20222326 (10 p.)

Impact of the 2014-2016 marine heatwave on US and Canada West Coast fisheries: Surprises and lessons from key case studies Free, Christopher M., Sean C. Anderson, Elizabeth A. Hellmers, Barbara A. Muhling, Michael O. Navarro, Kate Richerson, Lauren A. Rogers, William H. Satterthwaite, Andrew R. Thompson, Jenn M. Burt, Steven D. Gaines, Kristin N. Marshall, J. Wilson White, and Lyall F. Bellquist Fish and Fisheries 24(4):652-674

Effects of daily thermal fluctuations on the Atlantic silverside, a fish with temperature-dependent sex determination Hancock, Grace M., Gorka Sancho, Stephan B. Munch, and Santiago Salinas Journal of Fish Biology 102(5):1261-1266

2022-2023 California Current Ecosystem status report Harvey, Chris, Andy Leising, Nick Tolimieri, and Greg Williams (eds.) A report of the NOAA California Current Integrated Ecosystem Assessment Team (CCIEA) to the Pacific Fishery Management Council. 135 p.

Estimates of predator densities using mobile DIDSON surveys: Implications for survival of Central Valley Chinook Salmon Henderson, Mark J., Chris M. Loomis, Cyril J. Michel, Joe M. Smith, Ilysa S. Iglesias, Brendan M. Lehman, Nicholas J. Demetras, and David D. Huff North American Journal of Fisheries Management 43(3):628-645

Mesopelagic fishes are important prey for a diversity of predators Iglesias, Ilysa S., Jarrod A. Santora, Jerome Fiechter, and John C. Field Frontiers in Marine Science 10:1220088 (13 p.)

Increasing stability of a native freshwater fish assemblage following flow rehabilitation Jacinto, Emily, Nann A. Fangue, Dennis E. Cocherell, Joseph D. Kiernan, Peter B. Moyle, and Andrew L. Rypel Ecological Applications 33(5):e2868 (16 p.)

Modeling ocean distributions and abundances of natural- and hatchery-origin Chinook salmon stocks with integrated genetic and tagging data Jensen, Alexander J., Ryan P. Kelly, William H. Satterthwaite, Eric J. Ward, Paul Moran, and Andrew Olaf Shelton PeerJ 11:e16487 (29 p.)

Central Valley Recovery Domain Johnson, Rachel C., Kerrie Pipal, Flora Cordoleani, and Steve T. Lindley In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 137-174, 234-263. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Multiple-brooding rockfishes (Sebastes spp.) can utilize stored sperm from individual sires to fertilize consecutive broods Kashef, Neosha S., David M. Stafford, Susan M. Sogard, John C. Garza, John C. Field, and Elizabeth A. Gilbert-Horvath Journal of Fish Biology 102(4):952-961

Distribution, abundance, and habitat associations of young of the year of rockfish species (Sebastes spp.) in deep waters along the central coast of California Laidig, Thomas E., and Diana L. Watters Fishery Bulletin (U.S.) 121(4):199-213

A characterization of the deep-sea coral and sponge community along the Oregon Coast using a remotely operated vehicle on the EXPRESS 2022 expedition Laidig, Tom, Diana Watters, Meredith Everett, Nancy Prouty, and Elizabeth Clarke U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-692. 40 p.

Understanding the Alaska charter recreational fishing sector using website data Lew, D.K., K.D. Ray, and R. Kosaka U.S. Department of Commerce, NOAA Technical Memorandum NMFS-AFSC-476. 52 p.

Does fine-scale habitat diversity promote meaningful phenotypic diversity within a watershed network? Lusardi, Robert A., Randy Dahlgren, Erwin Van Nieuwenhuyse, George Whitman, Carson Jeffres, and Rachel Johnson Ecology 104(8): e4107 (5 p.)

Recent trends in marine and terrestrial environments and their likely influence on Pacific salmonids in California and Southern Oregon Mantua, Nate J., Lisa G. Crozier, and Laurie A. Weitkamp In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 9-24. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Image analysis approach to estimate fecundity of live-bearer rockfishes (Sebastes spp.) along the California Coast Mapes, Hayley, Sabrina G. Beyer, Jessica Choi, Emma Saas, Suzanne H. Alonzo, and John C. Field Environmental Biology of Fishes 106(8):1715-1732

Vulnerability to climate change of managed stocks in the California Current large marine ecosystem McClure, Michelle M., Melissa A. Haltuch, Ellen Willis-Norton, David D. Huff, Elliott L. Hazen, Lisa G. Crozier, Michael G. Jacox, Mark W. Nelson, Kelly S. Andrews, Lewis A.K. Barnett, Aaron M. Berger, Sabrina Beyer, Joe Bizzarro, David Boughton, Jason M. Cope, Mark Carr, Heidi Dewar, Edward Dick, Emmanis Dorval, Jason Dunham, Vladlena Gertseva, Correigh M. Greene, Richard G. Gustafson, Owen S. Hamel, Chris J. Harvey, Mark J. Henderson, Chris E. Jordan, Isaac C. Kaplan, Steven T. Lindley, Nathan J. Mantua, Sean E. Matson, Melissa H. Monk, Peter Moyle, Colin Nicol, John Pohl, Ryan R. Rykaczewski, Jameal F. Samhouri, Susan Sogard, Nick Tolimieri, John Wallace, Chantel Wetzel, and Steven J. Bograd Frontiers in Marine Science 10:1103767 (21 p.)

A novel diagnostic SNP panel for fishery management of green abalone (Haliotis fulgens) Mejia-Ruiz, Paulina, Ricardo Perez-Enriquez, Andrew Severin, Raul Octavio Martinez-Rincon, John Carlos Garza, Jorge Alberto Mares-Mayagoitia, and Fausto Valenzuela-Quinonez Fisheries Research 266:106786 (9 p.)

Discharge-mediated temperature management in a large regulated river, with implications for management of endangered fish Michel, C.J., M.E. Daniels, and E.M. Danner Water Resources Research 59(9):e2023WR035077 (18 p.)

Recent developments in empirical dynamic modelling Munch, Stephan B., Tanya L. Rogers, and George Sugihara Methods in Ecology and Evolution 14(3):732-745

Constraining nonlinear time series modeling with the metabolic theory of ecology Munch, Stephan B., Tanya L. Rogers, Celia C. Symons, David Anderson, and Frank Pennekamp Proceedings of the National Academy of Sciences of the United States of America 120(12):e2211758120 (9 p.)

Revisiting the status, data, and feasibility of alternative fishery management strategies for California Coastal Chinook salmon O’Farrell, Michael R., William H. Satterthwaite, Brian C. Spence, and Alexander J. Jensen U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-681. 38 p.

Field report: The state of California Chinook salmon populations O'Farrell, Michael, Nate Mantua, and Steve Lindley The Osprey 105:10-11

Flexible-pass-through antennas for half-duplex passive integrated transponder tags in medium to large rivers used to study size-selective reservoir passage Ohms, Haley A., J. Vincent Tranquilli, Gabriel Brooks, and David A. Boughton North American Journal of Fisheries Management 43(3):687-694

Review of 2022 ocean salmon fisheries: Stock assessment and fishery evaluation document for the Pacific Coast Salmon Fishery Management Plan Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 356 p.

Preseason report I: Stock abundance analysis and environmental assessment Part 1 for 2023 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 137 p.

Preseason report II: Proposed alternatives and environmental assessment Part 2 for 2023 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 70 p.

Preseason report III: Council adopted management measures and environmental assessment Part 3 for 2023 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 52 p.

Identifying social thresholds and measuring social achievement in social-ecological systems: A cross-regional comparison of fisheries in the United States Perng, Lansing Y., John Walden, Kirsten M. Leong, Geret S. DePiper, Cameron Speir, Suzana Black, Karma Norman, Stephen Kasperski, Mariska Weijerman, and Kirsten L.L. Oleson Marine Policy 152:105595 (17 p.)

Climate spaces and cliffs: A novel bovine thermodynamic and mass balances model Porter, Warren P., Alexa E. Bertz, Paul D. Mathewson, Luis C. Solorzano, Peter N. Dudley, Riccardo Bonazza, and Kifle G. Gebremedhin Animals 13(19):3043 (31 p.)

Assisted gene flow from outcrossing shows the potential for genetic rescue in an endangered salmon population Pregler, Kasey C., Mariska Obedzinski, Elizabeth A. Gilbert-Horvath, Benjamin White, Stephanie M. Carlson, and John Carlos Garza Conservation Letters 16(2):e12934 (12 p.)

A random coefficients model of seafood demand: Implications for consumer preferences and substitution patterns Ray, Kevin D., Daniel K. Lew, and Rosemary Kosaka Marine Resource Economics 38(2):113-133

Spatial and temporal genetic stock composition of river herring bycatch in southern New England Atlantic herring and mackerel fisheries Reid, Kerry, Jennifer A. Hoey, Benjamin I. Gahagan, Bradley P. Schondelmeier, Daniel J. Hasselman, Alison A. Bowden, Michael P. Armstrong, John Carlos Garza, and Eric P. Palkovacs Canadian Journal of Fisheries and Aquatic Sciences 80(2):360-374

Reading the biomineralized book of life: expanding otolith biogeochemical research and applications for fisheries and ecosystem-based management Reis-Santos, Patrick, Bronwyn M. Gillanders, Anna M. Sturrock, Christopher Izzo, Dion S. Oxman, Jessica A. Lueders-Dumont, Karin Hussy, Susanne E. Tanner, Troy Rogers, Zoe A. Doubleday, Allen H. Andrews, Clive Trueman, Deirdre Brophy, Jason D. Thiem, Lee J. Baumgartner, Malte Willmes, Ming-Tsung Chung, Patrick Charapata, Rachel C. Johnson, Stephen Trumble, Yvette Heimbrand, Karin E. Limburg, and Benjamin D. Walther Reviews in Fish Biology and Fisheries 33(2):411-449

Limited, asymmetric hybridization between coastal cutthroat trout and steelhead in a Northern California river Rizza, Samuel F., Margaret A. Wilzbach, Andrew P. Kinziger, Eric C. Anderson, and John Carlos Garza Journal of Heredity 114(3):219-230

Intermittent instability is widespread in plankton communities Rogers, Tanya L., Stephan B. Munch, Shin-ichiro S. Matsuzaki, and Celia C. Symons Ecology Letters 26(3):470-481

Long-distance migration is a major factor driving local adaptation at continental scale in Coho salmon Rougemont, Quentin, Amanda Xuereb, Xavier Dallaire, Jean-Sebastien Moore, Eric Normandeau, Alysse Perreault-Payette, Berenice Bougas, Eric B. Rondeau, Ruth E. Withler, Donald M. Van Doornik, Penelope A. Crane, Kerry A. Naish, John Carlos Garza, Terry D. Beacham, Ben F. Koop, and Louis Bernatchez Molecular Ecology 32(3):542-559

An approach to defining a Sacramento River Fall Chinook escapement objective considering natural production, hatcheries, and risk tolerance Satterthwaite, William H. San Francisco Estuary and Watershed Science 21(3):art3 (21 p.)

The reproducibility crisis meets stock assessment science: Sources of inadvertent bias in the stock assessment prioritization and review process Satterthwaite, William H. Fisheries Research 266:106763 (10 p.)

Methods for assessing and responding to bias and uncertainty in U.S. West Coast salmon abundance forecasts Satterthwaite, William H., and Andrew Olaf Shelton Fisheries Research 257:106502 (14 p.)