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SWFSC Publications Search

The SWFSC publications website serves as an archival repository of documents published and/or authored by SWFSC staff and funded partners. As a repository, the SWFSC publications website retains documents in their original published format to ensure public access to scientific information.

       

8,771 Search Result(s)



GSCRAMBLE: Simulation of admixed individuals without reuse of genetic material

Anderson, Eric C., Rachael M. Giglio, Matthew G. DeSaix, and Timothy J. Smyser
In press (available online)
Molecular Ecology Resources
https://doi.org/10.1111/1755-0998.14069
GSCRAMBLE: Simulation of admixed individuals without reuse of genetic material Anderson, Eric C., Rachael M. Giglio, Matthew G. DeSaix, and Timothy J. Smyser Molecular Ecology Resources
IP--Anderson
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Mysteries surrounding the Hector's Dolphin holotype Electra hectori P.-J. Van Beneden, 1881

Brownell, Robert L. Jr., Koen Van Waerebeek, and Robert Ewan Fordyce
In press (available online)
New Zealand Journal of Zoology
https://doi.org/10.1080/03014223.2024.2339890
Mysteries surrounding the Hector's Dolphin holotype Electra hectori P.-J. Van Beneden, 1881 Brownell, Robert L. Jr., Koen Van Waerebeek, and Robert Ewan Fordyce New Zealand Journal of Zoology
IP--Brownell
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Worldwide appraisal of knowledge gaps in the space usage of small pelagic fish: Highlights across stock uncertainties and research priorities

Catalan, Ignacio, et al.
In press (available online)
Reviews in Fisheries Science and Aquaculture
https://doi.org/10.1080/23308249.2025.2458869
Worldwide appraisal of knowledge gaps in the space usage of small pelagic fish: Highlights across stock uncertainties and research priorities Catalan, Ignacio, et al. Reviews in Fisheries Science and Aquaculture
IP--Catalan
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Incorporating local information to predict thermal stress for diverse species

FitzGerald, Alyssa
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2024-0189
Incorporating local information to predict thermal stress for diverse species FitzGerald, Alyssa Canadian Journal of Fisheries and Aquatic Sciences
IP--FitzGerald
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Composition and functional diversity of juvenile groundfish assemblages in the California Current

Gasbarro, Ryan, Jarrod A. Santora, Megan Cimino, Adena Schonfeld, Steven J. Bograd, Elliott L. Hazen, Brian K. Wells, and John C. Field
In press (available online)
Journal of Biogeography
https://doi.org/10.1111/jbi.15108
Composition and functional diversity of juvenile groundfish assemblages in the California Current Gasbarro, Ryan, Jarrod A. Santora, Megan Cimino, Adena Schonfeld, Steven J. Bograd, Elliott L. Hazen, Brian K. Wells, and John C. Field Journal of Biogeography
IP--Gasbarro
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Is AI your fishy friend?

Hazen, Elliott L.
In press (available online)
Fisheries
https://doi.org/10.1093/fshmag/vuaf004
Is AI your fishy friend? Hazen, Elliott L. Fisheries
IP--Hazen
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Thomas James (Mac) McIntyre (1940-2024) [obituary]

Heaney, Lawrence R., Robert L. Brownell Jr., Robert P. McIntyre, Charles W. Potter, Duane A. Schlitter, and Robert M. Timm
In press (available online)
Journal of Mammalogy
https://doi.org/10.1093/jmammal/gyae149
Thomas James (Mac) McIntyre (1940-2024) [obituary] Heaney, Lawrence R., Robert L. Brownell Jr., Robert P. McIntyre, Charles W. Potter, Duane A. Schlitter, and Robert M. Timm Journal of Mammalogy
IP--Heaney
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Assessing total mortality following seabird wrecks given variable data quantity and quality: the Cassin's auklet die-off

Jones, Timothy, Julia K. Parrish, Parker MacCready, Lisa T. Ballance, David W. Bradley, Hillary K. Burgess, Jane E. Dolliver, James T. Harvey, Trevor Joyce, Kirsten Lindquist, Jacqueline Lindsey, Hannarose M. Nevins, Jan Roletto, Laurie Wilson, and Charlie Wright
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2023-0382
Assessing total mortality following seabird wrecks given variable data quantity and quality: the Cassin's auklet die-off Jones, Timothy, Julia K. Parrish, Parker MacCready, Lisa T. Ballance, David W. Bradley, Hillary K. Burgess, Jane E. Dolliver, James T. Harvey, Trevor Joyce, Kirsten Lindquist, Jacqueline Lindsey, Hannarose M. Nevins, Jan Roletto, Laurie Wilson, and Charlie Wright Canadian Journal of Fisheries and Aquatic Sciences
IP--Jones
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Eco-evolutionary consequences of selective exploitation on metapopulations illustrated with Atlantic salmon

Lamarins, Amaia, Stephanie M. Carlson, Etienne Prevost, William H. Satterthwaite, and Mathieu Buoro
In press (available online)
Fish and Fisheries
https://doi.org/10.1111/faf.12881
Eco-evolutionary consequences of selective exploitation on metapopulations illustrated with Atlantic salmon Lamarins, Amaia, Stephanie M. Carlson, Etienne Prevost, William H. Satterthwaite, and Mathieu Buoro Fish and Fisheries
IP--Lamarins
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Development of a microhaplotype panel for steelhead/rainbow trout (Oncorhynchus mykiss) and application for phylogenetic analysis in California

Le Gall, Ronan, Moe Barthelemy, Anthony J. Clemento, Cassondra D. Columbus, Ellen Campbell, Elena C.A. Correa, Jeff A. Rodzen, John Carlos Garza, and Devon E. Pearse
In press (available online)
Conservation Genetics Resources
https://doi.org/10.1007/s12686-024-01374-2
Development of a microhaplotype panel for steelhead/rainbow trout (Oncorhynchus mykiss) and application for phylogenetic analysis in California Le Gall, Ronan, Moe Barthelemy, Anthony J. Clemento, Cassondra D. Columbus, Ellen Campbell, Elena C.A. Correa, Jeff A. Rodzen, John Carlos Garza, and Devon E. Pearse Conservation Genetics Resources
IP--LeGall
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Capture-recapture estimates of Antarctiv blue whale abundance and population growth rate

Olson, Paula A., Douglas Kinzey, Michael C. Double, Koji Matsuoka, and Ken Findlay
In press (available online)
Marine Mammal Science
https://doi.org/10.1111/mms.13215
Capture-recapture estimates of Antarctiv blue whale abundance and population growth rate Olson, Paula A., Douglas Kinzey, Michael C. Double, Koji Matsuoka, and Ken Findlay Marine Mammal Science
IP--Olson
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Population genetic structure of the bottlenose dolphin in the Turkish waters based on mtDNA sequences with implications for the Black Sea subspecies Tursiops truncatus ponticus

Tonay, Arda M., et al.
In press (available online)
Mitochondrial DNA Part A
https://doi.org/10.1080/24701394.2024.2427216
Population genetic structure of the bottlenose dolphin in the Turkish waters based on mtDNA sequences with implications for the Black Sea subspecies Tursiops truncatus ponticus Tonay, Arda M., et al. Mitochondrial DNA Part A
IP--Tonay
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Temporal dynamics and distributions of sardine and anchovy in the southern California Current Ecosystem

Tran, Bryant, Andrew D. Barton, Barbara Muhling, Brice X. Semmens, Brad Erisman, Matthew T. Craig, Sylvia Patricia Adelhid Jimenez-Rosenberg, Gerardo Aceves-Medina, and Andrew Thompson
In press (available online)
Canadian Journal of Fisheries and Aquatic Sciences
https://doi.org/10.1139/cjfas-2024-0151
Temporal dynamics and distributions of sardine and anchovy in the southern California Current Ecosystem Tran, Bryant, Andrew D. Barton, Barbara Muhling, Brice X. Semmens, Brad Erisman, Matthew T. Craig, Sylvia Patricia Adelhid Jimenez-Rosenberg, Gerardo Aceves-Medina, and Andrew Thompson Canadian Journal of Fisheries and Aquatic Sciences
IP--Tran
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Processes that influence bottom temperatures in the California Current System

Alexander, M.A., J.D. Scott, M.G. Jacox, D.J. Amaya, and L.M. Wilczynski
In press
Journal of Geophysical Research - Oceans
Processes that influence bottom temperatures in the California Current System Alexander, M.A., J.D. Scott, M.G. Jacox, D.J. Amaya, and L.M. Wilczynski Journal of Geophysical Research - Oceans
IP--Alexander
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Evaluating the robustness of generalized additive models as a tool for threshold detection in variable environments

Detmer, A. Raine, et al.
In press
Ecosphere
Evaluating the robustness of generalized additive models as a tool for threshold detection in variable environments Detmer, A. Raine, et al. Ecosphere
IP--Detmer
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Comparing fishery-independent and fishery-dependent data to characterize West Coast groundfish populations

Dodgen, Rose, Melissa Monk, Grant Waltz, and Dean Wendt
In press
Marine and Coastal Fisheries
Comparing fishery-independent and fishery-dependent data to characterize West Coast groundfish populations Dodgen, Rose, Melissa Monk, Grant Waltz, and Dean Wendt Marine and Coastal Fisheries
IP--Dodgen
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Reconstructing salmon growth trajectories through biochronologies across a highly variable growthscape

Evans, Kimberly, George Whitman, Malte Willmes, Eric Holmes, Flora Cordoleani, Carson Jeffres, and Rachel C. Johnson
In press
Canadian Journal of Fisheries and Aquatic Sciences
Reconstructing salmon growth trajectories through biochronologies across a highly variable growthscape Evans, Kimberly, George Whitman, Malte Willmes, Eric Holmes, Flora Cordoleani, Carson Jeffres, and Rachel C. Johnson Canadian Journal of Fisheries and Aquatic Sciences
IP--Evans
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Evaluating the potential to quantify salmon habitat via UAS-based particle image velecimetry

Harrison, Lee, Carl Legleiter, Brandon Overstreet, and James White
In press
Water Resources Research
Evaluating the potential to quantify salmon habitat via UAS-based particle image velecimetry Harrison, Lee, Carl Legleiter, Brandon Overstreet, and James White Water Resources Research
IP--Harrison
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Early evidence for establishment of a Chinook salmon population in a restored watershed

Hitt, Lauren G., Malte Willmes, George Whitman, Mackenzie C. Miner, Carson Jeffres, Rachel C. Johnson, Dennis E Cocherell, Nann A. Fangue, and Andrew L. Rypel
In press
Ecosphere
Early evidence for establishment of a Chinook salmon population in a restored watershed Hitt, Lauren G., Malte Willmes, George Whitman, Mackenzie C. Miner, Carson Jeffres, Rachel C. Johnson, Dennis E Cocherell, Nann A. Fangue, and Andrew L. Rypel Ecosphere
IP--Hitt
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Applications of species distribution modeling and future needs to support marine resource management

Karp, Melissa A., Megan Cimino, J. Kevin Craig, Daniel P. Crear, Christopher Haak, Elliott L. Hazen, Isaac Kaplan, Donald Kobayashi, Hassan Moustahfid, Barbara Muhling, Malin Pinsky, Laurel A. Smith, James T. Thorson, and Phoebe A. Woodworth-Jefcoats
In press
ICES Journal of Marine Science
Applications of species distribution modeling and future needs to support marine resource management Karp, Melissa A., Megan Cimino, J. Kevin Craig, Daniel P. Crear, Christopher Haak, Elliott L. Hazen, Isaac Kaplan, Donald Kobayashi, Hassan Moustahfid, Barbara Muhling, Malin Pinsky, Laurel A. Smith, James T. Thorson, and Phoebe A. Woodworth-Jefcoats ICES Journal of Marine Science
IP--Karp
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The role of kinship in shaping cetacean societies

Parsons, K.M., M. Krutzen, L. Gerber, E. Jourdain, C.M. Konrad Clarke, K.K. Martien, and A.D. Foote
In press
In: D. Croft et al. (eds.), The evolution of cetacean societies. University of Chicago Press.
The role of kinship in shaping cetacean societies Parsons, K.M., M. Krutzen, L. Gerber, E. Jourdain, C.M. Konrad Clarke, K.K. Martien, and A.D. Foote In: D. Croft et al. (eds.), The evolution of cetacean societies. University of Chicago Press.
IP--Parsons2
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Springtime upwelling conditions influence microbial communities and dissolved thiamin compounds in the California Current Ecosystem

Shannon, Kelly C., Gillian St. John, Robin Gould, Christopher Hartzell, Hailey Matthews, Elizabeth J. Brennan, Luis M. Bolanos, Steven T. Lindley, John C. Field, Nate Mantua, Rachel Johnson, Carson Jeffres, Frederick S. Colwell, and Christopher P. Suffridge
In press
Limnology and Oceanography
Springtime upwelling conditions influence microbial communities and dissolved thiamin compounds in the California Current Ecosystem Shannon, Kelly C., Gillian St. John, Robin Gould, Christopher Hartzell, Hailey Matthews, Elizabeth J. Brennan, Luis M. Bolanos, Steven T. Lindley, John C. Field, Nate Mantua, Rachel Johnson, Carson Jeffres, Frederick S. Colwell, and Christopher P. Suffridge Limnology and Oceanography
IP--Shannon
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What's in a name? Consumer preferences and premiums for distinct sustainability aspects of tuna

Wallmo, Kristy, and Rosemary Kosaka
In press
Coastal Management
What's in a name? Consumer preferences and premiums for distinct sustainability aspects of tuna Wallmo, Kristy, and Rosemary Kosaka Coastal Management
IP--Wallmo
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NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee

Watters, Diana (ed.), Joe Bizzarro, E.J. Dick, John Field, Tom Laidig, Melissa Monk, Nick Wegner, and William Watson
In press
In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Annual meeting of the TSC (2024). Pacific States Marine Fisheries Commission.
NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Watters, Diana (ed.), Joe Bizzarro, E.J. Dick, John Field, Tom Laidig, Melissa Monk, Nick Wegner, and William Watson In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Annual meeting of the TSC (2024). Pacific States Marine Fisheries Commission.
IP--Watters
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Long-distance winter migrations of chinstrap penguins and elephant seals to a persistent bloom at the edge of the Ross Gyre

Wilson, C., J.T. Hinke, and M. Mazloff
In press
Scientific Reports
Long-distance winter migrations of chinstrap penguins and elephant seals to a persistent bloom at the edge of the Ross Gyre Wilson, C., J.T. Hinke, and M. Mazloff Scientific Reports
IP--Wilson
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Multiple pathways of visual adaptations for water column usages in an Antarctic adaptive radiation

Yoder, E., E. Parker, B. Frederich, A. Tew, C.D. Jones, and A. Dornburg
In press
Ecology and Evolution
Multiple pathways of visual adaptations for water column usages in an Antarctic adaptive radiation Yoder, E., E. Parker, B. Frederich, A. Tew, C.D. Jones, and A. Dornburg Ecology and Evolution
IP--Yoder
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Linking projected changes in seasonal climate predictability and ENSO amplitude

Amaya, Dillon J., Nicola Maher, Clara Deser, Michael G. Jacox, Michael A. Alexander, Matthew Newman, Juliana Dias, and Jiale Lou
2025
Journal of Climate 38(3):675-688
https://doi.org/10.1175/JCLI-D-23-0648.1
Linking projected changes in seasonal climate predictability and ENSO amplitude Amaya, Dillon J., Nicola Maher, Clara Deser, Michael G. Jacox, Michael A. Alexander, Matthew Newman, Juliana Dias, and Jiale Lou Journal of Climate 38(3):675-688
2025Amaya
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Mesopelagic fish traits: Functions and trade-offs

Andresen, Henrike, Leandro Nole Eduardo, M. Pilar Olivar, P. Daniel van Denderen, Jerome Spitz, Aurore A. Maureaud, Anik Brind'Amour, Noelle M. Bowlin, Eva Garcia-Seoane, Tom J. Langbehn, Tracy T. Sutton, Heino O. Fock, Anne Gro V. Salvanes, and Martin Lindegren
2025
Fish and Fisheries 26(1):83-103
https://doi.org/10.1111/faf.12867
Mesopelagic fish traits: Functions and trade-offs Andresen, Henrike, Leandro Nole Eduardo, M. Pilar Olivar, P. Daniel van Denderen, Jerome Spitz, Aurore A. Maureaud, Anik Brind'Amour, Noelle M. Bowlin, Eva Garcia-Seoane, Tom J. Langbehn, Tracy T. Sutton, Heino O. Fock, Anne Gro V. Salvanes, and Martin Lindegren Fish and Fisheries 26(1):83-103
2025Andresen
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Growth of juvenile red abalone (Haliotis rufescens) co-cultivated with two densities of warty sea cucumber (Apostichopus parvimensis)

Bauer, Jeremie, Rodrigo Beas-Luna, Ricardo Searcy-Bernal, Fiorenza Michell, Leonardo Vazquez-Vera, Charles Boch, Eugenio Carpizo-Ituarte, Fabiola Lafarga-De la Cruz, Gabriela Montano-Moctezuma, and Julio Lorda
2025
New Zealand Journal of Marine and Freshwater Research 59(1):183-197
https://doi.org/10.1080/00288330.2024.2317886
Growth of juvenile red abalone (Haliotis rufescens) co-cultivated with two densities of warty sea cucumber (Apostichopus parvimensis) Bauer, Jeremie, Rodrigo Beas-Luna, Ricardo Searcy-Bernal, Fiorenza Michell, Leonardo Vazquez-Vera, Charles Boch, Eugenio Carpizo-Ituarte, Fabiola Lafarga-De la Cruz, Gabriela Montano-Moctezuma, and Julio Lorda New Zealand Journal of Marine and Freshwater Research 59(1):183-197
2025Bauer
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Elephant seals as ecosystem sentinels for the northeast Pacific Ocean twilight zone

Beltran, Roxanne S., Allison R. Payne, A. Marm Kilpatrick, Conner M. Hale, Madison Reed, Elliott L. Hazen, Steven J. Bograd, Joffrey Jouma'a, Patrick W. Robinson, Emma Houle, Wade Matern, Alea Sabah, Kathryn Lewis, Samantha Sebandal, Allison, Coughlin, Natalia Valdes Heredia, Francesca Penny, Sophie Rose Dalrymple, Heather Penny, Meghan Sherrier, Ben Peterson, Joanne Reiter, Burney J. Le Boeuf, Daniel P. Costa
2025
Science 387(6735):764-769
https://doi.org/10.1126/science.adp2244
Elephant seals as ecosystem sentinels for the northeast Pacific Ocean twilight zone Beltran, Roxanne S., Allison R. Payne, A. Marm Kilpatrick, Conner M. Hale, Madison Reed, Elliott L. Hazen, Steven J. Bograd, Joffrey Jouma'a, Patrick W. Robinson, Emma Houle, Wade Matern, Alea Sabah, Kathryn Lewis, Samantha Sebandal, Allison, Coughlin, Natalia Valdes Heredia, Francesca Penny, Sophie Rose Dalrymple, Heather Penny, Meghan Sherrier, Ben Peterson, Joanne Reiter, Burney J. Le Boeuf, Daniel P. Costa Science 387(6735):764-769
2025Beltran
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Multi-decade northward shift of loggerhead sea turtle pelagic habitat as the eastern North Pacific Transition Zone becomes more oligotrophic

Briscoe, Dana K., Larry B. Crowder, George H. Balazs, Jeffrey A. Seminoff, Alberto Abreu, Catherine A. Lee Hing, Masanori Kurita, Masanori Mori, Denise M. Parker, Marc R. Rice, Tomomi Saito, Bianca S. Santos, Calandra N. Turner Tomaszewicz, Noah Yamaguchi, and Jeffrey J. Polina
2025
Frontiers in Marine Science 11:1513162 (13 p.)
https://doi.org/10.3389/fmars.2024.1513162
Multi-decade northward shift of loggerhead sea turtle pelagic habitat as the eastern North Pacific Transition Zone becomes more oligotrophic Briscoe, Dana K., Larry B. Crowder, George H. Balazs, Jeffrey A. Seminoff, Alberto Abreu, Catherine A. Lee Hing, Masanori Kurita, Masanori Mori, Denise M. Parker, Marc R. Rice, Tomomi Saito, Bianca S. Santos, Calandra N. Turner Tomaszewicz, Noah Yamaguchi, and Jeffrey J. Polina Frontiers in Marine Science 11:1513162 (13 p.)
2025Briscoe
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In memoriam: Dmitry Tormosov 1937-2024

Clapham, Phillip J., Vladimir N. Burkanov, Yulia V. Ivashchenko, and Robert L. Brownell Jr.
2025
Marine Mammal Science 41(1):e13205 (3 p.)
https://doi.org/10.1111/mms.13205
In memoriam: Dmitry Tormosov 1937-2024 Clapham, Phillip J., Vladimir N. Burkanov, Yulia V. Ivashchenko, and Robert L. Brownell Jr. Marine Mammal Science 41(1):e13205 (3 p.)
2025Clapham
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The subpopulation problem in Pacific sardine, revisited

Craig, Matthew T., Brad E. Erisman, Ella S. Adams-Herrmann, Kelsey C. James, and Andrew R. Thompson
2025
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-713. 65 p.
https://doi.org/10.25923/zzvw-x557
The subpopulation problem in Pacific sardine, revisited Craig, Matthew T., Brad E. Erisman, Ella S. Adams-Herrmann, Kelsey C. James, and Andrew R. Thompson U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-713. 65 p.
2025Craig
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Spectacled porpoise Phocoena dioptrica Lahille, 1912

Dellabianca, Natalia A., Paula A. Olson, and Robert L. Brownell, Jr.
2025
In: Thomas A. Jefferson (ed.), Ridgway and Harrison's Handbook of Marine Mammals, Volume 1: Coastal dolphins and porpoises, p. 519-535. Academic Press.
https://doi.org/10.1016/B978-0-443-13746-4.00006-8
Spectacled porpoise Phocoena dioptrica Lahille, 1912 Dellabianca, Natalia A., Paula A. Olson, and Robert L. Brownell, Jr. In: Thomas A. Jefferson (ed.), Ridgway and Harrison's Handbook of Marine Mammals, Volume 1: Coastal dolphins and porpoises, p. 519-535. Academic Press.
2025Dellabianca
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Consumer- and seaweed-specific impacts of invasion-mediated changes to detrital subsidies on rocky shores

DeSantiago, Ricardo, Wendi K. White, John R. Hyde, Katherine M. Swiney, and Jeremy D. Long
2025
Ecosphere 16(2):e70165 (12 p.)
https://doi.org/10.1002/ecs2.70165
Consumer- and seaweed-specific impacts of invasion-mediated changes to detrital subsidies on rocky shores DeSantiago, Ricardo, Wendi K. White, John R. Hyde, Katherine M. Swiney, and Jeremy D. Long Ecosphere 16(2):e70165 (12 p.)
2025DeSantiago
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Systematic review of somatic growth patterns in relation to population structure for Pacific Sardine (Sardinops sagax) along the Pacific Coast of North America

Erisman, Brad, Matthew Craig, Kelsey James, Brittany Schwartzkopf, and Emmanis Dorval
2025
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-708. 67 p.
https://doi.org/10.25923/0j1j-xv61
Systematic review of somatic growth patterns in relation to population structure for Pacific Sardine (Sardinops sagax) along the Pacific Coast of North America Erisman, Brad, Matthew Craig, Kelsey James, Brittany Schwartzkopf, and Emmanis Dorval U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-708. 67 p.
2025Erisman
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A collaborative climate vulnerability assessment of California marine fishery species

Frawley, Timothy, Mikaela Provost, Lyall Bellquist, Noah Ben-Aderet, Hannah Blondin, Stephanie Brodie, Mercedes Pozo Buil, Michael Jacox, Steven J. Bograd, Elliott L. Hazen, Huff McGonigal, and Kirsten Ramey
2025
PLOS Climate 4(2):e0000574 (32 p.)
https://doi.org/10.1371/journal.pclm.0000574
A collaborative climate vulnerability assessment of California marine fishery species Frawley, Timothy, Mikaela Provost, Lyall Bellquist, Noah Ben-Aderet, Hannah Blondin, Stephanie Brodie, Mercedes Pozo Buil, Michael Jacox, Steven J. Bograd, Elliott L. Hazen, Huff McGonigal, and Kirsten Ramey PLOS Climate 4(2):e0000574 (32 p.)
2025Frawley
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Integrating landscapes of fear and energy reveals the behavioural strategies that shape predator-prey interactions

Gil, Michael A., Cyril J. Michel, Simone Olivetti, Vamsi Sridharan, and Andrew M. Hein
2025
Ecology Letters 28(2):e70068 (12 p.)
https://doi.org/10.1111/ele.70068
Integrating landscapes of fear and energy reveals the behavioural strategies that shape predator-prey interactions Gil, Michael A., Cyril J. Michel, Simone Olivetti, Vamsi Sridharan, and Andrew M. Hein Ecology Letters 28(2):e70068 (12 p.)
2025Gil
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Status, trends and conservation of global sea turtle populations

Hays, Graeme C., Jacques-Olivier Laloe, and Jeffrey A. Seminoff
2025
Nature Reviews Biodiversity 1(2):119-133
https://doi.org/10.1038/s44358-024-00011-y
Status, trends and conservation of global sea turtle populations Hays, Graeme C., Jacques-Olivier Laloe, and Jeffrey A. Seminoff Nature Reviews Biodiversity 1(2):119-133
2025Hays
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Long-term population trend of northern anchovy (Engraulis mordax) in the California Current system

Hinchliffe, Charles, Peter T. Kuriyama, Andre E. Punt, John C. Field, Andrew R. Thompson, Jarrod A. Santora, Barbara A. Muhling, Stefan Koenigstein, Pierre-Yves Hernvann, and Desiree Tommasi
2025
ICES Journal of Marine Science 82(1):fsae177 (17 p.)
https://doi.org/10.1093/icesjms/fsae177
Long-term population trend of northern anchovy (Engraulis mordax) in the California Current system Hinchliffe, Charles, Peter T. Kuriyama, Andre E. Punt, John C. Field, Andrew R. Thompson, Jarrod A. Santora, Barbara A. Muhling, Stefan Koenigstein, Pierre-Yves Hernvann, and Desiree Tommasi ICES Journal of Marine Science 82(1):fsae177 (17 p.)
2025Hinchliffe
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Identifying the influence of hydroclimatic factors on streamflow: A multi-model data driven approach

Islam, Khandaker Iftekharul, and James Matthew Gilbert
2025
Journal of Hydrology 652:132684 (22 p.)
https://doi.org/10.1016/j.jhydrol.2025.132684
Identifying the influence of hydroclimatic factors on streamflow: A multi-model data driven approach Islam, Khandaker Iftekharul, and James Matthew Gilbert Journal of Hydrology 652:132684 (22 p.)
2025Islam
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Canadian Journal of Fisheries and Aquatic Sciences 81(7):935-951
https://doi.org/10.1139/cjfas-2023-0228
Estimating spawning green sturgeon (Acipenser medirostris Ayres, 1854) abundance in the Sacramento River using side-scan sonar and N-mixture models Battaile, Brian C., Ethan A. Mora, Brendan M. Lehman, and Peter N. Dudley Canadian Journal of Fisheries and Aquatic Sciences 81(7):935-951
2024Battaile
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Common dolphin (Delphinus delphis) mitochondrial genomes from Senegal reveal geographic structure across the North Atlantic but provide no support for global long-beaked clade

Becker, Madeleine A., Katherine R. Murphy, Frederick I. Archer, Thomas A. Jefferson, Lucy W. Keith-Diagne, Charles W. Potter, M. Fernanda Urrutia-Osorio, Ibrahima Ndong, and Michael R. McGowen
2024
Marine Mammal Science 40(4):e13144 (21 p.)
https://doi.org/10.1111/mms.13144
Common dolphin (Delphinus delphis) mitochondrial genomes from Senegal reveal geographic structure across the North Atlantic but provide no support for global long-beaked clade Becker, Madeleine A., Katherine R. Murphy, Frederick I. Archer, Thomas A. Jefferson, Lucy W. Keith-Diagne, Charles W. Potter, M. Fernanda Urrutia-Osorio, Ibrahima Ndong, and Michael R. McGowen Marine Mammal Science 40(4):e13144 (21 p.)
2024Becker
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Shifting ocean conditions influence temporal variation in the fecundity of California Current rockfishes (Sebastes spp.)

Beyer, Sabrina G., Susan M. Sogard, David M. Stafford, Neosha S. Kashef, Abel Rodriguez, Suzanne H. Alonzo, and John C. Field
2024
Canadian Journal of Fisheries and Aquatic Sciences 81(6):781-795
https://doi.org/10.1139/cjfas-2023-0253
Shifting ocean conditions influence temporal variation in the fecundity of California Current rockfishes (Sebastes spp.) Beyer, Sabrina G., Susan M. Sogard, David M. Stafford, Neosha S. Kashef, Abel Rodriguez, Suzanne H. Alonzo, and John C. Field Canadian Journal of Fisheries and Aquatic Sciences 81(6):781-795
2024Beyer
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Advancing the climate-biodiversity-fisheries nexus in the UN Decade of Ocean Science for Sustainable Development

Bograd, Steven J., Laura C. Anderson, Gabrielle Canonico, Sanae Chiba, Emanuele Di Lorenzo, Claire Enterline, Edward Gorecki, Roger Griffis, Kristin M. Kleisner, Hannah Lachance, Margaret Leinen, Katherine E. Mills, Frank E. Muller-Karger, Grace Roskar, Jorn Schmidt, Rachel Seary, Sophie Seeyave, Tan Shau Hwai, Joana Soares, and Michelle Tigchelaar
2024
ICES Journal of Marine Science 81(9):1705-1711
https://doi.org/10.1093/icesjms/fsae111
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2024Bograd
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1
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Bonett-Calzada, Brenda, Fausto Valenzuela-Quinonez, Miguel A. Del Rio-Portilla, Natalia J. Bayona-Vasquez, Carmen E. Vargas-Peralta, John R. Hyde, and Fabiola Lafarga-De la Cruz
2024
Genes 15(10):1303 (17 p.)
https://doi.org/10.3390/genes15101303
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2024BonettCalzada
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Ontogenetic vertical distribution and abundance of early life history stages of mesopelagic fishes off central California

Bowlin, Noelle M., Andrew R. Thompson, Juan P. Zwolinski, William Watson, and Philip A. Hastings
2024
In: Jeffrey M. Leis, William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.), Early life history and biology of marine fishes: research inspired by the work of H. Geoffrey Moser, p. 185-201. U.S. Department of Commerce, NOAA Professional Paper NMFS 24.
https://doi.org/10.7755/PP.24.14
Ontogenetic vertical distribution and abundance of early life history stages of mesopelagic fishes off central California Bowlin, Noelle M., Andrew R. Thompson, Juan P. Zwolinski, William Watson, and Philip A. Hastings In: Jeffrey M. Leis, William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.), Early life history and biology of marine fishes: research inspired by the work of H. Geoffrey Moser, p. 185-201. U.S. Department of Commerce, NOAA Professional Paper NMFS 24.
2024Bowlin
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Building a coordinated framework for research and monitoring in large-scale international marine protected areas: The Ross Sea region as a model system

Brooks, Cassandra, Sharon Stammerjohn, Grant Ballard, Alice K. DuVivier, Eileen Hofmann, Michelle LaRue, Cara Nissen, Alexander J. Orona, B. Jack Pan, Annie E. Schmidt, Nathan Walker, George M. Watters, and John Weller
2024
Conservation Letters 17(6):e13053 (9 p.)
https://doi.org/10.1111/conl.13053
Building a coordinated framework for research and monitoring in large-scale international marine protected areas: The Ross Sea region as a model system Brooks, Cassandra, Sharon Stammerjohn, Grant Ballard, Alice K. DuVivier, Eileen Hofmann, Michelle LaRue, Cara Nissen, Alexander J. Orona, B. Jack Pan, Annie E. Schmidt, Nathan Walker, George M. Watters, and John Weller Conservation Letters 17(6):e13053 (9 p.)
2024Brooks
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Avian influenza H5N1 threatens imperiled krill-dependent predators in Antarctica

Brownell, Robert L. Jr., Douglas J. Krause, Alastair M.M. Baylis, Carolina A. Bonin, Larissa R. Oliveira, Marcela M. Uhart, Mauricio Ulloa, and George M. Watters
2024
Frontiers in Marine Science 11:1453737 (4 p.)
https://doi.org/10.3389/fmars.2024.1453737
Avian influenza H5N1 threatens imperiled krill-dependent predators in Antarctica Brownell, Robert L. Jr., Douglas J. Krause, Alastair M.M. Baylis, Carolina A. Bonin, Larissa R. Oliveira, Marcela M. Uhart, Mauricio Ulloa, and George M. Watters Frontiers in Marine Science 11:1453737 (4 p.)
2024Brownell2
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Michael F. Tillman 1943-2023 [obituary]

Brownell, Robert L. Jr., Linda L. Jones, Douglas P. DeMaster, Greg P. Donovan, Stephen B. Reilly, Rolland A. Schmitten, Jeffrey M. Breiwick, Robert Suydam, Daryl J. Boness, and William W. Fox Jr.
2024
Marine Mammal Science 40(1):326-331
https://doi.org/10.1111/mms.13100
Michael F. Tillman 1943-2023 [obituary] Brownell, Robert L. Jr., Linda L. Jones, Douglas P. DeMaster, Greg P. Donovan, Stephen B. Reilly, Rolland A. Schmitten, Jeffrey M. Breiwick, Robert Suydam, Daryl J. Boness, and William W. Fox Jr. Marine Mammal Science 40(1):326-331
2024Brownell
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1

Evaluating the time to detect biological effects of ocean acidification and warming: an example using simulations of purple sea urchin settlement

Buchheister, Andre, Paul McElhany, and Eric P. Bjorkstedt
2024
Marine Ecology Progress Series 738:133-149
https://doi.org/10.3354/meps14598
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2024Buchheister
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A high-quality blue whale genome, segmental duplications, and historical demography

Bukhman, Yury V., Phillip A. Morin, Susanne Meyer, Li-Fang Chu, Jeff K. Jacobsen, Jessica Antosiewicz-Bourget, Daniel Mamott, Maylie Gonzales, Cara Argus, Jennifer Bolin, Mark E. Berres, Olivier Fedrigo, John Steill, Scott A. Swanson, Peng Jiang, Arang Rhie, Giulio Formenti, Adam M. Phillippy, Robert S. Harris, Jonathan M.D. Wood, Kerstin Howe, Bogdan M. Kirilenko, Chetan Munegowda, Michael Hiller, Aashish Jain, Daisuke Kihara, J. Spencer Johnston, Alexander Ionkov, Kalpana Raja, Huishi Toh, Aimee Lang, Magnus Wolf, Erich D. Jarvis, James A. Thomson, Mark J.P. Chaisson, and Ron Stewart
2024
Molecular Biology and Evolution 41(3):msae036 (22 p.)
https://doi.org/10.1093/molbev/msae036
A high-quality blue whale genome, segmental duplications, and historical demography Bukhman, Yury V., Phillip A. Morin, Susanne Meyer, Li-Fang Chu, Jeff K. Jacobsen, Jessica Antosiewicz-Bourget, Daniel Mamott, Maylie Gonzales, Cara Argus, Jennifer Bolin, Mark E. Berres, Olivier Fedrigo, John Steill, Scott A. Swanson, Peng Jiang, Arang Rhie, Giulio Formenti, Adam M. Phillippy, Robert S. Harris, Jonathan M.D. Wood, Kerstin Howe, Bogdan M. Kirilenko, Chetan Munegowda, Michael Hiller, Aashish Jain, Daisuke Kihara, J. Spencer Johnston, Alexander Ionkov, Kalpana Raja, Huishi Toh, Aimee Lang, Magnus Wolf, Erich D. Jarvis, James A. Thomson, Mark J.P. Chaisson, and Ron Stewart Molecular Biology and Evolution 41(3):msae036 (22 p.)
2024Bukhman
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You shall not pass: The Pacific oxygen minimum zone creates a boundary to shortfin mako shark distribution in the Eastern North Pacific Ocean

Byrne, Michael E., Heidi Dewar, Jeremy J. Vaudo, Bradley M. Wetherbee, and Mahmood S. Shivji
2024
Diversity and Distributions 30(12):e13924 (14 p.)
https://doi.org/10.1111/ddi.13924
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2024Byrne
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Biologically Important Areas II for cetaceans within U.S. and adjacent waters - West Coast Region

Calambokidis, John, Michaela A. Kratofil, Daniel M. Palacios, Barbara A. Lagerquist, Gregory S. Schorr, M. Bradley Hanson, Robin W. Baird, Karin A. Forney, Elizabeth A. Becker, R. Cotton Rockwood, and Elliott L. Hazen
2024
Frontiers in Marine Science 11:1283231 (31 p.)
https://doi.org/10.3389/fmars.2024.1283231
Biologically Important Areas II for cetaceans within U.S. and adjacent waters - West Coast Region Calambokidis, John, Michaela A. Kratofil, Daniel M. Palacios, Barbara A. Lagerquist, Gregory S. Schorr, M. Bradley Hanson, Robin W. Baird, Karin A. Forney, Elizabeth A. Becker, R. Cotton Rockwood, and Elliott L. Hazen Frontiers in Marine Science 11:1283231 (31 p.)
2024Calambokidis
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1

Estimates of marine mammal, sea turtle, and seabird bycatch in the California large-mesh drift gillnet fishery: 1990-2023

Carretta, James V.
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-700. 66 p.
https://doi.org/10.25923/b3m4-8e23
Estimates of marine mammal, sea turtle, and seabird bycatch in the California large-mesh drift gillnet fishery: 1990-2023 Carretta, James V. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-700. 66 p.
2024Carretta
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1

U.S. Pacific marine mammal stock assessments: 2023

Carretta, James V., Erin M. Oleson, Karin A. Forney, Amanda L. Bradford, Kym Yano, David W. Weller, Aimee R. Lang, Jason Baker, Anthony J. Orr, Brad Hanson, Jeffrey E. Moore, Megan Wallen, and Robert L. Brownell Jr.
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-704. 414 p.
https://doi.org/10.25923/aqdn-f357
U.S. Pacific marine mammal stock assessments: 2023 Carretta, James V., Erin M. Oleson, Karin A. Forney, Amanda L. Bradford, Kym Yano, David W. Weller, Aimee R. Lang, Jason Baker, Anthony J. Orr, Brad Hanson, Jeffrey E. Moore, Megan Wallen, and Robert L. Brownell Jr. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-704. 414 p.
2024Carretta2
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1

Sources of human-related injury and mortality for U.S. Pacific West Coast marine mammal stock assessments, 2018-2022

Carretta, James V., Justin Greenman, Kristin Wilkinson, Lauren Saez, Dan Lawson, and Justin Viezbicke
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-705 (241 p.).
https://doi.org/10.25923/tj6f-y570
Sources of human-related injury and mortality for U.S. Pacific West Coast marine mammal stock assessments, 2018-2022 Carretta, James V., Justin Greenman, Kristin Wilkinson, Lauren Saez, Dan Lawson, and Justin Viezbicke U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-705 (241 p.).
2024Carretta3
1
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Early larvae of the whitespotted rockfish (Sebastes moseri Eitner, 1999) and the dwarf-red rockfish (S. rufinanus Lea and Fitch, 1972) (Pisces: Sebastidae) identified by molecular methods

Charter, Sharon R., William Watson, and John R. Hyde
2024
In: Jeffrey M. Leis, William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.), Early life history and biology of marine fishes: research inspired by the work of H. Geoffrey Moser, p. 143-154. U.S. Department of Commerce, NOAA Professional Paper NMFS 24.
https://doi.org/10.7755/PP.24.11
Early larvae of the whitespotted rockfish (Sebastes moseri Eitner, 1999) and the dwarf-red rockfish (S. rufinanus Lea and Fitch, 1972) (Pisces: Sebastidae) identified by molecular methods Charter, Sharon R., William Watson, and John R. Hyde In: Jeffrey M. Leis, William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.), Early life history and biology of marine fishes: research inspired by the work of H. Geoffrey Moser, p. 143-154. U.S. Department of Commerce, NOAA Professional Paper NMFS 24.
2024Charter
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Bellwethers of change: population modelling of North Pacific humpback whales from 2002 through 2021 reveals shift from recovery to climate response

Cheeseman, Ted, Jay Barlow, Jo Marie Acebes, Katherina Audley, Lars Bejder, Caitlin Birdsall, Olga Solis Bracamontes, Amanda L. Bradford, Josie Byington, John Calambokidis, Rachel Cartwright, Jen Cedarleaf, Andrea Jacqueline Garcia Chavez, Jens Currie, Rouenne Camille De Castro, Joelle De Weerdt, Nicole Doe, Thomas Doniol-Valcroze, Karina Dracott, Olga Filatova, Rachel Finn, Kiirsten R. Flynn, John Ford, Astrid Frisch-Jordan, Chris Gabriele, Beth Goodwin, Craig Hayslip, Jackie Hildering, Marie C. Hill, Jeff K. Jacobsen, M. Esther Jimenez-Lopez, Meagan Jones, Nozomi Kobayashi, Marc Lammers, Edward Lyman, Mark Malleson, Evgeny Mamaev, Pamela Martinez Loustalot, Annie Masterman, Craig O. Matkin, Christie McMillan, Jeff Moore, John Moran, Janet L. Neilson, Hayley Newell, Haruna Okabe, Marilia Olio, Christian D. Ortega-Ortiz, Adam A. Pack, Daniel M. Palacios, Heidi Pearson, Ester Quintana-Rizzo, Raul Ramirez Barragan, Nicola Ransome, Hiram Rosales-Nanduca, Fred Sharpe, Tasli Shaw, Ken Southerland, Stephanie Stack, Iain Staniland, Janice Straley, Andrew Szabo, Suzie Teerlink, Olga Titova, Jorge Urban-Ramirez, Martin van Aswegen, Marcel Vinicius, Olga von Ziegesar, Briana Witteveen, Janie Wray, Kymberly Yano, Igor Yegin, Denny Zwiefelhofer, and Phil Clapham
2024
Royal Society Open Science 11(2):231462 (19 p.)
https://doi.org/10.1098/rsos.231462
Bellwethers of change: population modelling of North Pacific humpback whales from 2002 through 2021 reveals shift from recovery to climate response Cheeseman, Ted, Jay Barlow, Jo Marie Acebes, Katherina Audley, Lars Bejder, Caitlin Birdsall, Olga Solis Bracamontes, Amanda L. Bradford, Josie Byington, John Calambokidis, Rachel Cartwright, Jen Cedarleaf, Andrea Jacqueline Garcia Chavez, Jens Currie, Rouenne Camille De Castro, Joelle De Weerdt, Nicole Doe, Thomas Doniol-Valcroze, Karina Dracott, Olga Filatova, Rachel Finn, Kiirsten R. Flynn, John Ford, Astrid Frisch-Jordan, Chris Gabriele, Beth Goodwin, Craig Hayslip, Jackie Hildering, Marie C. Hill, Jeff K. Jacobsen, M. Esther Jimenez-Lopez, Meagan Jones, Nozomi Kobayashi, Marc Lammers, Edward Lyman, Mark Malleson, Evgeny Mamaev, Pamela Martinez Loustalot, Annie Masterman, Craig O. Matkin, Christie McMillan, Jeff Moore, John Moran, Janet L. Neilson, Hayley Newell, Haruna Okabe, Marilia Olio, Christian D. Ortega-Ortiz, Adam A. Pack, Daniel M. Palacios, Heidi Pearson, Ester Quintana-Rizzo, Raul Ramirez Barragan, Nicola Ransome, Hiram Rosales-Nanduca, Fred Sharpe, Tasli Shaw, Ken Southerland, Stephanie Stack, Iain Staniland, Janice Straley, Andrew Szabo, Suzie Teerlink, Olga Titova, Jorge Urban-Ramirez, Martin van Aswegen, Marcel Vinicius, Olga von Ziegesar, Briana Witteveen, Janie Wray, Kymberly Yano, Igor Yegin, Denny Zwiefelhofer, and Phil Clapham Royal Society Open Science 11(2):231462 (19 p.)
2024Cheeseman
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Multi-trophic level responses to marine heatwave disturbances in the California Current Ecosystem

Chen, Tz-Chian, Mati Kahru, Michael R. Landry, Mark D. Ohman, Andrew R. Thompson, and Michael R. Stukel
2024
Ecology Letters 27(12):e14502 (14 p.)
https://doi.org/10.1111/ele.14502
Multi-trophic level responses to marine heatwave disturbances in the California Current Ecosystem Chen, Tz-Chian, Mati Kahru, Michael R. Landry, Mark D. Ohman, Andrew R. Thompson, and Michael R. Stukel Ecology Letters 27(12):e14502 (14 p.)
2024Chen
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Tracked gulls help identify potential zones of interaction between whales and shipping traffic

Cimino, Megan A., Heather Welch, Jarrod A. Santora, David Kroodsma, Elliott L. Hazen, Steven J. Bograd, Pete Warzybok, Jaime Jahncke, and Scott A. Shaffer
2024
Marine Ornithology 52(1):61-72
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2024Cimino
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The capacity of sentinel species to detect changes in environmental conditions and ecosystem structure

Clark-Wolf, T.J., Katie A. Holt, Erik Johansson, Anna C. Nisi, Kasim Rafiq, Leigh West, P. Dee Boersma, Elliott L. Hazen, Sue E. Moore, and Briana Abrahms
2024
Journal of Applied Ecology 61(7):1638-1648
https://doi.org/10.1111/1365-2664.14669
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2024ClarkWolf
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Atmospheric precursors of skillful SST prediction in the northeast Pacific

Cluett, A.A., M.G. Jacox, D.J. Amaya, M.A. Alexander, and J.D. Scott
2024
Journal of Climate 37(20):5337-5353
https://doi.org/10.1175/JCLI-D-24-0121.1
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2024Cluett
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Restoring freshwater habitat mosaics to promote resilience of vulnerable salmon populations

Cordoleani, Flora, Corey C. Phillis, Anna M. Sturrock, Malte Willmes, George Whitman, Eric Holmes, Peter K. Weber, Carson Jeffres, and Rachel C. Johnson
2024
Ecosphere 15(3):e4803 (18 p.)
https://doi.org/10.1002/ecs2.4803
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0
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The effects of the Affordable Care Act's insurance subsidies on a commercial fishing fleet

Crosson, Scott, Cameron Speir, and Christina Wiegand
2024
Marine Resource Economics 39(1):61-71
https://doi.org/10.1086/727574
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2024Crosson
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