NOAA FISHERIES

Genetic and environmental drivers of migratory behavior in western burrowing owls and implications for conservation and management Barr, Kelly, Christen M. Bossu, Rachael A. Bay, Eric C. Anderson, Jim Belthoff, Lynne A. Trulio, Debra Chromczak, Colleen L. Wisinski, Thomas B. Smith, and Kristen C. Ruegg Evolutionary Applications 16(12):1889-1900

Deconstructing dams and disease: predictions for salmon disease risk following Klamath River dam removals Bartholomew, Jerri L., Julie D. Alexander, Justin Alvarez, Stephen D. Atkinson, Michael Belchik, Sarah J. Bjork, J. Scott Foott, Alex Gonyaw, Mark E. Hereford, Richard A. Holt, Barry McCovey Jr., Nicholas A. Som, Toz Soto, Anne Voss, Thomas H. Williams, Ted G. Wise, and Sascha L. Hallett Frontiers in Ecology and Evolution 11:1245967 (24 p.)

Distinct patterns of inheritance shape life-history traits in steelhead trout Beulke, Anne K., Alicia Abadia-Cardoso, Devon E. Pearse, Laura C. Goetz, Neil F. Thompson, Eric C. Anderson, and John Carlos Garza Molecular Ecology 32(24):6896-6912

A Field Guide to the Fishes of the Salish Sea is a portable work of art: Theodore W. Pietsch, James W. Orr (illustrated by Joseph R. Tomelleri), A field guide to the fishes of the Salish Sea: Puget Sound and the straits of Georgia and Juan de Fuca, Washington State and British Columbia. Chatwin Books, 2023 [book review] Bizzarro, Joseph J. Environmental Biology of Fishes 106(12):2219-2221

Trophic guilds of marine predators in the California Current Large Marine Ecosystem Bizzarro, Joseph J., John C. Field, Jarrod A. Santora, K. Alexandra Curtis, and Brian K. Wells Frontiers in Marine Science 10:1195000 (21 p.)

A multi-predator trophic database for the California Current Large Marine Ecosystem Bizzarro, Joseph J., Lynn Dewitt, Brian K. Wells, K. Alexandra Curtis, Jarrod A. Santora, and John C. Field Scientific Data 10:496 (10 p.)

Natal contributions of kokanee salmon to Flaming Gorge Reservoir, Wyoming-Utah: An evaluation using otolith microchemistry Black, A.R., J.D. Walrath, M. Willmes, and M.C. Quist Journal of Fish and Wildlife Management 14(1):90-107

South-Central / Southern California Coast Recovery Domain Boughton, David A. In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 175-209. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Migrant steelhead passage after dam removal, river reroute, and channel evolution in the Carmel River, California Boughton, David A., Haley A. Ohms, and Cory Hamilton Report to California American Water and the California Coastal Office of the National Marine Fisheries Service, West Coast Region. U.S. Department of Commerce, NOAA Southwest Fisheries Science Center, Fisheries Ecology Division, Santa Cruz, California. 8 p.

Ecological forecasts for marine resource management during climate extremes Brodie, Stephanie, Mercedes Pozo Buil, Heather Welch, Steven J. Bograd, Elliott L. Hazen, Jarrod A. Santora, Rachel Seary, Isaac D. Schroeder, and Michael G. Jacox Nature Communications 14:7701 (10 p.)

Interactions between life history and the environment on changing growth rates of Chinook salmon Buckner, Jack H., William H. Satterthwaite, Benjamin W. Nelson, and Eric J. Ward Canadian Journal of Fisheries and Aquatic Sciences 80(4):648-662

Role of maturation and mortality in portfolio effects and climate resilience Carvalho, Paul G., William H. Satterthwaite, Michael R. O'Farrell, Cameron Speir, and Eric P. Palkovacs Canadian Journal of Fisheries and Aquatic Sciences 80(6):924-941

Age structure of natural versus hatchery-origin endangered Chinook salmon and implications for fisheries management in California Chen, Emily K., William H. Satterthwaite, Brett J. Kormos, Rachel C. Johnson, Corey C. Phillis, and Stephanie M. Carlson Marine Ecology Progress Series 723:37-55

A unifying framework for understanding ecological and evolutionary population connectivity Cramer, Alli N., Jennifer A. Hoey, Tara E. Dolan, Remy Gatins, Jason A. Troy, Jordan L. Chancellor, Eric P. Palkovacs, John Carlos Garza, and Roxanne S. Beltran Frontiers in Ecology and Evolution 11:1072825 (15 p.)

Development of a castable, GPS enabled, Miniaturized Predation Event Recorder (mPER) to quantify predation of juvenile fishes Demetras, Nicholas J., T. Reid Nelson, Brendan M. Lehman, and Cyril J. Michel Fisheries Research 264:106706 (7 p.)

Low-coverage whole genome sequencing for highly accurate population assignment: Mapping migratory connectivity in the American Redstart (Setophaga ruticilla) DeSaix, Matthew G., Eric C. Anderson, Christen M. Bossu, Christine E. Rayne, Teia M. Schweizer, Nicholas J. Bayly, Darshan S. Narang, Julie C. Hagelin, H. Lisle Gibbs, James F. Saracco, Thomas W. Sherry, Michael S. Webster, Thomas B. Smith, Peter P. Marra, and Kristen C. Ruegg Molecular Ecology 32(20):5528-5540

Age structure augments the predictive power of time series for fisheries and conservation Dolan, Tara E., Eric P. Palkovacs, Tanya L. Rogers, and Stephan B. Munch Canadian Journal of Fisheries and Aquatic Sciences 80(5):795-807

Environmental variability and krill abundance in the central California Current: Implications for ecosystem monitoring Dorman, Jeffrey G., William J. Sydeman, Sarah Ann Thompson, Joseph D. Warren, Helen J. Killeen, Brian A. Hoover, John C. Field, and Jarrod A. Santora Frontiers in Marine Science 10:1099482 (17 p.)

A meta-analysis and model comparison of juvenile salmon growth across different habitat types Dudley, Peter N., Albert Noble Hendrix, and Ann-Marie K. Osterback River Research and Applications 39(2):177-188

NOAA West Coast Deep-Sea Coral Initiative 2018-2021: Final report Duncan, Elizabeth, Caitlin Adams, Chris Caldow, Eric Chavez, Elizabeth Clarke, Heather Coleman, Meredith Everett, Tom Hourigan, Tom Laidig, Jenny Waddell, and Arliss Winship U.S. Department of Commerce, NOAA Technical Memorandum NMFS-OHC-12. 70 p.

Six years of fluvial response to a large dam removal on the Carmel River, California, USA East, Amy E., Lee R. Harrison, Douglas P. Smith, Joshua B. Logan, and Rosealea M. Bond Earth Surface Processes and Landforms 48(8):1487-1501

An anchovy ecosystem indicator of marine predator foraging and reproduction Fennie, H. William, Rachel Seary, Barbara A. Muhling, Steven J. Bograd, Stephanie Brodie, Megan A. Cimino, Elliott L. Hazen, Michael G. Jacox, Elizabeth A. McHuron, Sharon Melin, Jarrod A. Santora, Justin J. Suca, Julie A. Thayer, Andrew R. Thompson, Pete Warzybok, and Desiree Tommasi Proceedings of the Royal Society B 290(1992):20222326 (10 p.)

Impact of the 2014-2016 marine heatwave on US and Canada West Coast fisheries: Surprises and lessons from key case studies Free, Christopher M., Sean C. Anderson, Elizabeth A. Hellmers, Barbara A. Muhling, Michael O. Navarro, Kate Richerson, Lauren A. Rogers, William H. Satterthwaite, Andrew R. Thompson, Jenn M. Burt, Steven D. Gaines, Kristin N. Marshall, J. Wilson White, and Lyall F. Bellquist Fish and Fisheries 24(4):652-674

Effects of daily thermal fluctuations on the Atlantic silverside, a fish with temperature-dependent sex determination Hancock, Grace M., Gorka Sancho, Stephan B. Munch, and Santiago Salinas Journal of Fish Biology 102(5):1261-1266

2022-2023 California Current Ecosystem status report Harvey, Chris, Andy Leising, Nick Tolimieri, and Greg Williams (eds.) A report of the NOAA California Current Integrated Ecosystem Assessment Team (CCIEA) to the Pacific Fishery Management Council. 135 p.

Estimates of predator densities using mobile DIDSON surveys: Implications for survival of Central Valley Chinook Salmon Henderson, Mark J., Chris M. Loomis, Cyril J. Michel, Joe M. Smith, Ilysa S. Iglesias, Brendan M. Lehman, Nicholas J. Demetras, and David D. Huff North American Journal of Fisheries Management 43(3):628-645

Mesopelagic fishes are important prey for a diversity of predators Iglesias, Ilysa S., Jarrod A. Santora, Jerome Fiechter, and John C. Field Frontiers in Marine Science 10:1220088 (13 p.)

Increasing stability of a native freshwater fish assemblage following flow rehabilitation Jacinto, Emily, Nann A. Fangue, Dennis E. Cocherell, Joseph D. Kiernan, Peter B. Moyle, and Andrew L. Rypel Ecological Applications 33(5):e2868 (16 p.)

Modeling ocean distributions and abundances of natural- and hatchery-origin Chinook salmon stocks with integrated genetic and tagging data Jensen, Alexander J., Ryan P. Kelly, William H. Satterthwaite, Eric J. Ward, Paul Moran, and Andrew Olaf Shelton PeerJ 11:e16487 (29 p.)

Central Valley Recovery Domain Johnson, Rachel C., Kerrie Pipal, Flora Cordoleani, and Steve T. Lindley In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 137-174, 234-263. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Multiple-brooding rockfishes (Sebastes spp.) can utilize stored sperm from individual sires to fertilize consecutive broods Kashef, Neosha S., David M. Stafford, Susan M. Sogard, John C. Garza, John C. Field, and Elizabeth A. Gilbert-Horvath Journal of Fish Biology 102(4):952-961

Distribution, abundance, and habitat associations of young of the year of rockfish species (Sebastes spp.) in deep waters along the central coast of California Laidig, Thomas E., and Diana L. Watters Fishery Bulletin (U.S.) 121(4):199-213

A characterization of the deep-sea coral and sponge community along the Oregon Coast using a remotely operated vehicle on the EXPRESS 2022 expedition Laidig, Tom, Diana Watters, Meredith Everett, Nancy Prouty, and Elizabeth Clarke U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-692. 40 p.

Understanding the Alaska charter recreational fishing sector using website data Lew, D.K., K.D. Ray, and R. Kosaka U.S. Department of Commerce, NOAA Technical Memorandum NMFS-AFSC-476. 52 p.

Does fine-scale habitat diversity promote meaningful phenotypic diversity within a watershed network? Lusardi, Robert A., Randy Dahlgren, Erwin Van Nieuwenhuyse, George Whitman, Carson Jeffres, and Rachel Johnson Ecology 104(8): e4107 (5 p.)

Recent trends in marine and terrestrial environments and their likely influence on Pacific salmonids in California and Southern Oregon Mantua, Nate J., Lisa G. Crozier, and Laurie A. Weitkamp In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 9-24. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Image analysis approach to estimate fecundity of live-bearer rockfishes (Sebastes spp.) along the California Coast Mapes, Hayley, Sabrina G. Beyer, Jessica Choi, Emma Saas, Suzanne H. Alonzo, and John C. Field Environmental Biology of Fishes 106(8):1715-1732

Vulnerability to climate change of managed stocks in the California Current large marine ecosystem McClure, Michelle M., Melissa A. Haltuch, Ellen Willis-Norton, David D. Huff, Elliott L. Hazen, Lisa G. Crozier, Michael G. Jacox, Mark W. Nelson, Kelly S. Andrews, Lewis A.K. Barnett, Aaron M. Berger, Sabrina Beyer, Joe Bizzarro, David Boughton, Jason M. Cope, Mark Carr, Heidi Dewar, Edward Dick, Emmanis Dorval, Jason Dunham, Vladlena Gertseva, Correigh M. Greene, Richard G. Gustafson, Owen S. Hamel, Chris J. Harvey, Mark J. Henderson, Chris E. Jordan, Isaac C. Kaplan, Steven T. Lindley, Nathan J. Mantua, Sean E. Matson, Melissa H. Monk, Peter Moyle, Colin Nicol, John Pohl, Ryan R. Rykaczewski, Jameal F. Samhouri, Susan Sogard, Nick Tolimieri, John Wallace, Chantel Wetzel, and Steven J. Bograd Frontiers in Marine Science 10:1103767 (21 p.)

A novel diagnostic SNP panel for fishery management of green abalone (Haliotis fulgens) Mejia-Ruiz, Paulina, Ricardo Perez-Enriquez, Andrew Severin, Raul Octavio Martinez-Rincon, John Carlos Garza, Jorge Alberto Mares-Mayagoitia, and Fausto Valenzuela-Quinonez Fisheries Research 266:106786 (9 p.)

Discharge-mediated temperature management in a large regulated river, with implications for management of endangered fish Michel, C.J., M.E. Daniels, and E.M. Danner Water Resources Research 59(9):e2023WR035077 (18 p.)

Recent developments in empirical dynamic modelling Munch, Stephan B., Tanya L. Rogers, and George Sugihara Methods in Ecology and Evolution 14(3):732-745

Constraining nonlinear time series modeling with the metabolic theory of ecology Munch, Stephan B., Tanya L. Rogers, Celia C. Symons, David Anderson, and Frank Pennekamp Proceedings of the National Academy of Sciences of the United States of America 120(12):e2211758120 (9 p.)

Revisiting the status, data, and feasibility of alternative fishery management strategies for California Coastal Chinook salmon O’Farrell, Michael R., William H. Satterthwaite, Brian C. Spence, and Alexander J. Jensen U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-681. 38 p.

Field report: The state of California Chinook salmon populations O'Farrell, Michael, Nate Mantua, and Steve Lindley The Osprey 105:10-11

Flexible-pass-through antennas for half-duplex passive integrated transponder tags in medium to large rivers used to study size-selective reservoir passage Ohms, Haley A., J. Vincent Tranquilli, Gabriel Brooks, and David A. Boughton North American Journal of Fisheries Management 43(3):687-694

Review of 2022 ocean salmon fisheries: Stock assessment and fishery evaluation document for the Pacific Coast Salmon Fishery Management Plan Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 356 p.

Preseason report I: Stock abundance analysis and environmental assessment Part 1 for 2023 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 137 p.

Preseason report II: Proposed alternatives and environmental assessment Part 2 for 2023 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 70 p.

Preseason report III: Council adopted management measures and environmental assessment Part 3 for 2023 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 52 p.

Identifying social thresholds and measuring social achievement in social-ecological systems: A cross-regional comparison of fisheries in the United States Perng, Lansing Y., John Walden, Kirsten M. Leong, Geret S. DePiper, Cameron Speir, Suzana Black, Karma Norman, Stephen Kasperski, Mariska Weijerman, and Kirsten L.L. Oleson Marine Policy 152:105595 (17 p.)

Climate spaces and cliffs: A novel bovine thermodynamic and mass balances model Porter, Warren P., Alexa E. Bertz, Paul D. Mathewson, Luis C. Solorzano, Peter N. Dudley, Riccardo Bonazza, and Kifle G. Gebremedhin Animals 13(19):3043 (31 p.)

Assisted gene flow from outcrossing shows the potential for genetic rescue in an endangered salmon population Pregler, Kasey C., Mariska Obedzinski, Elizabeth A. Gilbert-Horvath, Benjamin White, Stephanie M. Carlson, and John Carlos Garza Conservation Letters 16(2):e12934 (12 p.)

A random coefficients model of seafood demand: Implications for consumer preferences and substitution patterns Ray, Kevin D., Daniel K. Lew, and Rosemary Kosaka Marine Resource Economics 38(2):113-133

Spatial and temporal genetic stock composition of river herring bycatch in southern New England Atlantic herring and mackerel fisheries Reid, Kerry, Jennifer A. Hoey, Benjamin I. Gahagan, Bradley P. Schondelmeier, Daniel J. Hasselman, Alison A. Bowden, Michael P. Armstrong, John Carlos Garza, and Eric P. Palkovacs Canadian Journal of Fisheries and Aquatic Sciences 80(2):360-374

Reading the biomineralized book of life: expanding otolith biogeochemical research and applications for fisheries and ecosystem-based management Reis-Santos, Patrick, Bronwyn M. Gillanders, Anna M. Sturrock, Christopher Izzo, Dion S. Oxman, Jessica A. Lueders-Dumont, Karin Hussy, Susanne E. Tanner, Troy Rogers, Zoe A. Doubleday, Allen H. Andrews, Clive Trueman, Deirdre Brophy, Jason D. Thiem, Lee J. Baumgartner, Malte Willmes, Ming-Tsung Chung, Patrick Charapata, Rachel C. Johnson, Stephen Trumble, Yvette Heimbrand, Karin E. Limburg, and Benjamin D. Walther Reviews in Fish Biology and Fisheries 33(2):411-449

Limited, asymmetric hybridization between coastal cutthroat trout and steelhead in a Northern California river Rizza, Samuel F., Margaret A. Wilzbach, Andrew P. Kinziger, Eric C. Anderson, and John Carlos Garza Journal of Heredity 114(3):219-230

Intermittent instability is widespread in plankton communities Rogers, Tanya L., Stephan B. Munch, Shin-ichiro S. Matsuzaki, and Celia C. Symons Ecology Letters 26(3):470-481

Long-distance migration is a major factor driving local adaptation at continental scale in Coho salmon Rougemont, Quentin, Amanda Xuereb, Xavier Dallaire, Jean-Sebastien Moore, Eric Normandeau, Alysse Perreault-Payette, Berenice Bougas, Eric B. Rondeau, Ruth E. Withler, Donald M. Van Doornik, Penelope A. Crane, Kerry A. Naish, John Carlos Garza, Terry D. Beacham, Ben F. Koop, and Louis Bernatchez Molecular Ecology 32(3):542-559

Project report: Rockfish Recruitment and Ecosystem Assessment (NOAA Ship Reuben Lasker, RL-23-03, May 16 - June 25, 2023) Sakuma, Keith NOAA Fisheries, Southwest Fisheries Science Center, Fisheries Ecology Division, Santa Cruz, California. 17 p.

The reproducibility crisis meets stock assessment science: Sources of inadvertent bias in the stock assessment prioritization and review process Satterthwaite, William H. Fisheries Research 266:106763 (10 p.)

An approach to defining a Sacramento River Fall Chinook escapement objective considering natural production, hatcheries, and risk tolerance Satterthwaite, William H. San Francisco Estuary and Watershed Science 21(3):art3 (21 p.)

Methods for assessing and responding to bias and uncertainty in U.S. West Coast salmon abundance forecasts Satterthwaite, William H., and Andrew Olaf Shelton Fisheries Research 257:106502 (14 p.)

Comparing fishery impacts and maturation schedules of hatchery-origin vs. natural-origin fish from a threatened Chinook salmon stock Satterthwaite, William H., Emily K. Chen, Tracy R. McReynolds, Audrey E. Dean, Shanae D. Allen, and Michael R. O'Farrell San Francisco Estuary and Watershed Science 21(4):art3 (26 p.)

Daily stream temperature predictions for free-flowing streams in the Pacific Northwest, USA Siegel, Jared E., Aimee H. Fullerton, Alyssa M. FitzGerald, Damon Holzer, and Chris E. Jordan PLOS Water 2(8):e0000119 (27 p.)

Prediction-based approach for quantifying phenological mismatch across landscapes under climate change Song, Yiluan, Stephan B. Munch, and Kai Zhu Landscape Ecology 38(3):821-845

Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest Southwest Fisheries Science Center U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686. 263 p.

Southwest Fisheries Science Center decadal strategy for Pacific salmon recovery science Southwest Fisheries Science Center U.S. Department of Commerce, NOAA Fisheries Southwest Fisheries Science Center, Fisheries Ecology Division, Santa Cruz, California. 11 p.

A measure of port-level resilience to shocks in commercial fisheries Speir, Cameron, Amanda Phillips, Aaron Mamula, and Karma Norman Marine Policy 151:105575 (12 p.)

North-Central California Coast Recovery Domain Spence, Brian C. In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 56-136. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Simulating the migration dynamics of juvenile salmonids through rivers and estuaries using a hydrodynamically driven enhanced particle tracking model Sridharan, Vamsi Krishna, Doug Jackson, Andrew M. Hein, Russell W. Perry, Adam C. Pope, Noble Hendrix, Eric M. Danner, and Steven T. Lindley Ecological Modelling 482:110393 (27 p.)

Multiscale relationships between humpback whales and forage species hotspots within a large marine ecosystem Szesciorka, Angela R., David A. Demer, Jarrod A. Santora, Karin A. Forney, and Jeff E. Moore Ecological Applications 33(2):e2794 (20 p.)

Predicting nonlinear dynamics of short-lived penaeid shrimp species in the Gulf of Mexico Tsai, Cheng-Han, Stephan B. Munch, Michelle D. Masi, and Adam G. Pollack Canadian Journal of Fisheries and Aquatic Sciences 80(1):57-68

NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Watters, Diana (ed.), John Field, Tom Laidig, Nick Wegner, William Watson, Joe Bizzarro, and E.J. Dick In: Report of the Sixty-third Annual Meeting, Technical Subcommittee (TSC) of the Canada-United States Groundfish Committee (18-19 April 2023), p. 265-276. Pacific States Marine Fisheries Commission.

Implementing an ecosystem oceanography program to increase capacity and preparedness for dynamic ocean management and fishery challenges Wells, Brian K., and Jarrod A. Santora Frontiers in Marine Science 10:1192052 (16 p.)

Southern Oregon / Northern California Coast Recovery Domain Williams, Thomas H. In: Southwest Fisheries Science Center, Viability assessment for Pacific salmon and steelhead listed under the Endangered Species Act: Southwest, p. 25-55. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-686.

Intraspecific variation among Chinook Salmon populations indicates physiological adaptation to local environmental conditions Zillig, Kenneth W., Alyssa M. FitzGerald, Robert A. Lusardi, Dennis E. Cocherell, and Nann A. Fangue Conservation Physiology 11(1):coad044 (23 p.)

CKMRpop: Forward-in-time simulation and tabulation of pairwise kin relationships in age-structured populations Anderson, Eric C. Molecular Ecology Resources 22(3):1190-1199

Genetic assignment of fisheries bycatch reveals disproportionate mortality among Alaska Northern Fulmar breeding colonies Baetscher Diana S., Jessie Beck, Eric C. Anderson, Kristen Ruegg, Andrew M. Ramey, Scott Hatch, Hannah Nevins, Shannon M. Fitzgerald, and John Carlos Garza Evolutionary Applications 15(3):447-458

Spatial heterogeneity in prey availability, feeding success, and dietary selectivity for the threatened longfin smelt Barros, Arthur, James A. Hobbs, Malte Willmes, Christina M. Parker, Micah Bisson, Nann A. Fangue, Andrew L. Rypel, and Levi S. Lewis Estuaries and Coasts 45(6):1766-1779

Recurrent neural networks for partially observed dynamical systems Bhat, Uttam, and Stephan B. Munch Physical Review E 105(4):042205 (9 p.)

Spatiotemporal variability in environmental conditions influences the performance and behavior of juvenile steelhead in a coastal California lagoon Bond, Rosealea M., Joseph D. Kiernan, Ann-Marie K. Osterback, Cynthia H. Kern, Alexander E. Hay, Joshua M. Meko, Miles E. Daniels, and Jeffrey M. Perez Estuaries and Coasts 45(6):1749-1765

Quantitative scenarios for reintroduction of spring-run Chinook salmon to Tuolumne River Boughton, David A. NOAA Southwest Fisheries Science Center, Santa Cruz, California. 31 p.

Response of a threatened steelhead trout population to water-provisioning scenarios for the Carmel River, California Boughton, David A., and Haley A. Ohms NOAA Southwest Fisheries Science Center, Santa Cruz, California. 38 p.

Capacity of two Sierra Nevada rivers for reintroduction of anadromous salmonids: insights from a high-resolution view Boughton, David A., Lee R. Harrison, Sara N. John, Rosealea M. Bond, Colin L. Nicol, Carl J. Legleiter, and Ryan T. Richardson Transactions of the American Fisheries Society 151(1):13-41

Integration of steelhead viability monitoring, recovery plans and fisheries management in the southern coastal area Boughton, David, Jennifer Nelson, and Michael K. Lacy California Department of Fish and Wildlife, Fish Bulletin 182. 116 p.

Rapid range expansion of a marine ectotherm reveals the demographic and ecological consequences of short-term variability in seawater temperature and dissolved oxygen Burford, Benjamin P., Lauren A. Wild, Richard Schwarz, Ellen M. Chenoweth, Ashwin Sreenivasan, Robin Elahi, Nicholas Carey, Henk-Jan T. Hoving, Jan M. Straley, and Mark W. Denny American Naturalist 199(4):523-550

The limits of convergence in the collective behavior of competing marine taxa Burford, Benjamin P., R. Russell Williams, Nicholas J. Demetras, Nicholas Carey, Jeremy Goldbogen, William F. Gilly, Jeffrey Harding, Mark W. Denny Ecology and Evolution 12(3):e8747 (14 p.)

Polygenic discrimination of migratory phenotypes in an estuarine forage fish Campbell, Matthew A., Shannon E.K. Joslin, Alisha M. Goodbla, Malte Willmes, James A. Hobbs, Levi S. Lewis, and Amanda J. Finger G3 Genes Genomes Genetics 12(8):jkac133 (10 p.)

Comments on identifying causal relationships in nonlinear dynamical systems via empirical mode decomposition Chang, Chun-Wei, Stephan B. Munch, and Chih-hao Hsieh Nature Communications 13:2860 (4 p.)

Evidence of temperature-driven shifts in market squid Doryteuthis opalescens densities and distribution in the California Current Ecosystem Chasco, Brandon E., Mary E. Hunsicker, Kym C. Jacobson, Owen T. Welch, Cheryl A. Morgan, Barbara A. Muhling, and Jeff A. Harding Marine and Coastal Fisheries 14(1):e10190 (13 p.)

Western gull foraging behavior as an ecosystem state indicator in coastal California Cimino, Megan A., Scott A. Shaffer, Heather Welch, Jarrod A. Santora, Pete Warzybok, Jaime Jahncke, Isaac Schroeder, Elliott L. Hazen, and Steven J. Bograd Frontiers in Marine Science 8:790559 (14 p.)

Variation in juvenile salmon growth opportunities across a shifting habitat mosaic Coleman, Laura, Rachel Johnson, Flora Cordoleani, Corey Phillis, and Anna Sturrock San Francisco Estuary and Watershed Sciences 20(1):1 (18 p.)

Variability in foodscapes and fish growth across a habitat mosaic: Implications for management and ecosystem restoration Cordoleani, Flora, Eric Holmes, Miranda Bell-Tilcock, Rachel C. Johnson, and Carson Jeffres Ecological Indicators 136:108681 (11 p.)

Forecasting in the face of ecological complexity: Number and strength of species interactions determine forecast skill in ecological communities Daugaard, Uriah, Stephan B. Munch, David Inauen, Frank Pennekamp, and Owen L. Petchey Ecology Letters 25(9):1974-1985

Using decades of spawning data and hydraulic models to construct a temperature-dependent resource selection function for management of an endangered salmonid Dudley, Peter N., Sara N. John, Miles E. Daniels, and Eric M. Danner Canadian Journal of Fisheries and Aquatic Science 79(1):73-81

Cytological and molecular approaches for ploidy determination: Results from a wild Walleye population Farrell, Collin J., Brett M. Johnson, Adam G. Hansen, Christopher A. Myrick, Eric C. Anderson, Thomas A. Delomas, Andrea D. Schreier, and Joel P. Van Eenennaam North American Journal of Fisheries Management 42(4):849-856

Quantification of thermal impacts across freshwater life stages to improve temperature management for anadromous salmonids FitzGerald, Alyssa M., and Benjamin T. Martin Conservation Physiology 10(1):coac013 (17 p.)

Physical and biological constraints on the capacity for life-history expression of anadromous salmonids: an Eel River, California, case study FitzGerald, Alyssa M., David A. Boughton, Joshua Fuller, Sara N. John, Benjamin T. Martin, Lee R. Harrison, and Nathan J. Mantua Canadian Journal of Fisheries and Aquatic Sciences 79(7):1023-1041

From drought to deluge: spatiotemporal variation in migration routing, survival, travel time and floodplain use of an endangered migratory fish Hance, Dalton J., Russell W. Perry, Adam C. Pope, Arnold J. Ammann, Jason L. Hassrick, and Gabriel Hansen Canadian Journal of Fisheries and Aquatic Sciences 79(3):410-428

Evaluating the sensitivity of multi-dimensional model predictions of salmon habitat to the source of remotely sensed river bathymetry Harrison, Lee R., Carl J. Legleiter, Vamsi K. Sridharan, Peter N. Dudley, and Miles E. Daniels Water Resources Research 58(12):e2022WR033097 (20 p.)