NOAA FISHERIES

Recent changes in the spatial and temporal distribution of salmon habitat in the North Pacific Lindley, Steven T., Nathan J. Mantua, Tanya L. Rogers, and Stephan B. Munch In: Jeongseok Park, William Stanbury, and MacKenzie Kermoade (eds.), Third NPAFC-IYS Virtual Workshop on Linkages between Pacific Salmon Production and Environmental Changes (May 25-28, 2021). North Pacific Anadromous Fish Commission, NPAFC Technical Report 17:108-112.

Mechanisms, impacts, and mitigation for thiamine deficiency and early life stage mortality in California's Central Valley Chinook salmon [abstract] Mantua, Nate, Rachel Johnson, John Field, Steve Lindley, Tommy Williams, Anne Todgham, Nanne Fangue, Carson Jeffres, Heather Bell, Dennis Cocherell, Jacques Rinchard, Donald Tillitt, Bruce Finney, Dale Honeyfield, Taylor Lipscomb, Scott Foott, Kevin Kwak, Mark Adkison, Brett Kormos, Steve Litvin, and Iliana Ruiz-Cooley In: Jeongseok Park, William Stanbury, and MacKenzie Kermoade (eds.), Third NPAFC-IYS Virtual Workshop on Linkages between Pacific Salmon Production and Environmental Changes (May 25-28, 2021). North Pacific Anadromous Fish Commission, NPAFC Technical Report 17:92-93.

Reproductive hyperallometry and managing the world's fisheries Marshall, Dustin J., Michael Bode, Marc Mangel, Robert Arlinghaus, and E.J. Dick Proceedings of the National Academy of Sciences of the Unites States of America 118(34):e2100695118 (8 p.)

Nonlinear survival of imperiled fish informs managed flows in a highly modified river Michel, Cyril J., Jeremy J. Notch, Flora Cordoleani, Arnold J. Ammann, and Eric M. Danner Ecosphere 12(5):e03498 (20 p.)

NMFS Southwest Fisheries Science Center: Draft agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Monk, Melissa (ed.), John Field, Tom Laidig, Nick Wegner, Sabrina Beyer, and Joe Bizzarro In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Annual meeting of the TSC (April 20-21, 2021), p. 217-230. Pacific States Marine Fisheries Commission.

The status of vermilion rockfish (Sebastes miniatus) and sunset rockfish (Sebastes crocotulus) in U.S. waters of the coast of California north of Point Conception in 2021 Monk, Melissa H., E.J. Dick, John C. Field, Emma M. Saas, and Tanya L. Rogers Pacific Fishery Management Council, Portland, Oregon. 331 p.

A latitudinal gradient in thermal transgenerational plasticity and a test of theory Munch, Stephan B., Who Seung Lee, Matthew Walsh, Thomas Hurst, Ben A. Wasserman, Marc Mangel, and Santiago Salinas Proceedings of the Royal Society B 288(1950):20210797 (8 p.)

Effects of artifical lighting at night on predator density and salmonid predation Nelson, Thomas Reid, Cyril J. Michel, Meagan P. Gary, Brendan M. Lehman, and Nicholas J. Demetras Transactions of the American Fisheries Society 150(2):147-159

Probabilistic graphical inference of pedigrees Ng, Thomas Ph.D. dissertation, University of California, Santa Cruz

Coldwater fish in a warm water world: Implications for predation of salmon smolts during estuary transit Nobriga, Matthew L., Cyril J. Michel, Rachel C. Johnson, and John D. Wikert Ecology and Evolution 11(15):10381-10395

Human wellbeing Norman, Karma, Amanda Phillips, Cameron Speir, Jameal Samhouri, Mary Fisher, Daniel Holland, Stephen Kasperski, and Chris J. Harvey In: Chris J. Harvey et al. (eds.), Ecosystem status report of the California Current for 2020-21: A summary of ecosystem indicators compiled by the California Current Integrated Ecosystem Assessment Team (CCIEA), p. 77-89. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-170.

Triennial migration and philopatry in the critically endangered soupfin shark Galeorhinus galeus Nosal, Andrew P., Daniel P. Cartamil, Arnold J. Ammann, Lyall F. Bellquist, Noah J. Ben-Aderet, Kayla M. Blincow, Echelle S. Burns, Eric D. Chapman, Ryan M. Freedman, A. Peter Klimley, Ryan K. Logan, Christopher G. Lowe, Brice X. Semmens, Connor F. White, and Philip A. Hastings Journal of Applied Ecology 58(8):1570-1582

A rebuilding time model for Pacific salmon O'Farrell, Michael R., and William H. Satterthwaite Fisheries Research 238:105900 (9 p.)

Carmel River fisheries report 2021 Ohms, Haley, David Boughton, Dereka Chargualaf, and Karlee Liddy U.S. Department of Commerce, NOAA Southwest Fisheries Science Center, Santa Cruz, California. 89 p.

Merging computational fluid dynamics and machine learning to reveal animal migration strategies Olivetti, Simone, Michael A. Gil, Vamsi K. Sridharan, and Andrew M. Hein Methods in Ecology and Evolution 12(7):1186-1200

Review of 2020 ocean salmon fisheries: Stock assessment and fishery evaluation document for the Pacific Coast Salmon Fishery Management Plan Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 340 p.

Preseason report I: Stock abundance analysis and environmental assessment Part 1 for 2021 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 132 p.

Preseason report II: Proposed alternatives and environmental assessment Part 2 for 2021 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 94 p.

Preseason report III: Council adopted management measures and environmental assessment Part 3 for 2021 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 51 p.

NOAA Fisheries Climate Science Strategy five year progress report Peterson, Jay, Roger Griffis, Phoebe Woodworth-Jefcoats, Ariel Jacobs, Anne Hollowed, Ed Farley, Janet Duffy-Anderson, Martin Dorn, Thomas P. Hurst, Jamal Moss, Lauren Rogers, Kalei Shotwell, Toby Garfield, Richard Zabel, Yvonne deReynier, Eric Shott, Lisa Crozier, Steven Bograd, Nate Mantua, Jameal Samhouri, John Quinlan, Karla Gore, Roldan Munoz, Jennifer Leo, Lauren Waters, Michael Burton, Vincent Saba, Diane Borggaard, Marianne Ferguson, and Wendy Morrison U.S. Department of Commerce, NOAA Technical Memorandum NMFS-F/SPO-228. 157 p.

The effects of water temperature, acoustic tag type, size at tagging, and surgeon experience on juveile Chinook salmon (Oncorhynchus tshawytscha) tag retention and growth Robinson, Rebecca R., Jeremy Notch, Alex McHuron, Renae Logston, Tom Pham, and Arnold J. Ammann Animal Biotelemetry 9:22 (10 p.)

The American Kestrel (Falco sparverius) genoscape: Implications for monitoring, management, and subspecies boundaries Ruegg, Kristen C., Michaela Brinkmeyer, Christen M. Bossu, Rachael A. Bay, Eric C. Anderson, Clint W. Boal, Russell D. Dawson, Amber Eschenbauch, Christopher J.W. McClure, Karl E. Miller, Lance Morrow, Jill Morrow, M. David Oleyar, Bill Ralph, Sarah Schulwitz, Ted Swem, Jean-Francois Therrien, Rich Van Buskirk, Thomas B. Smith, and Julie A. Heath Ornithology 138(2):ukaa051 (14 p.)

Linking climate niches across seasons to assess population vulnerability in a migratory bird Ruegg, Kristen, Eric C. Anderson, Marius Somveille, Rachael A. Bay, Mary Whitfield, Eben H. Paxton, and Thomas B. Smith Global Change Biology 27(15):3519-3531

Importance of non-native isopods and other terrestrial prey resources to steelhead/rainbow trout Oncorhynchus mykiss in coastal streams in Big Sur, California Rundio, David E., and Steven T. Lindley Ecology of Freshwater Fish 30(4):419-432

Differences in growth and condition of juvenile Oncorhynchus mykiss related to sex and a migration-associated genomic region Rundio, David E., John Carlos Garza, Steven T. Lindley, Thomas H. Williams, and Devon E. Pearse Canadian Journal of Fisheries and Aquatic Sciences 78(3):322-331

Cruise report, NOAA Ship Reuben Lasker RL-21-03, April 28 - June 11, 2021: Rockfish recruitment and ecosystem assessment Sakuma, Keith NOAA National Marine Fisheries Service, SWFSC Fisheries Ecology Division, Santa Cruz, California. 21 p.

Pelagic biodiversity, ecosystem function, and services: an integrated observing and modeling approach Santora, Jarrod A., Isaac D. Schroeder, Steven J. Bograd, Francisco P. Chavez, Megan A. Cimino, Jerome Fiechter, Elliott L. Hazen, Maria T. Kavanaugh, Monique Messie, Rebecca R. Miller, Keith M. Sakuma, William J. Sydeman, Brian K. Wells, and John C. Field Oceanography 34(2):16-37

Diverse integrated ecosystem approach overcomes pandemic-related fisheries monitoring challenges Santora, Jarrod A., Tanya L. Rogers, Megan A. Cimino, Keith M. Sakuma, Keith D. Hanson, E.J. Dick, Jaime Jahncke, Pete Warzybok, and John C. Field Nature Communications 12:6492 (10 p.)

Climate and ocean drivers Schroeder, Isaac D., Andrew Leising, Steven Bograd, Lynn deWitt, Newell (Toby) Garfield, Elliott L. Hazen, Dale Robinson, Daniel L. Rudnick, Michael Jacox, Jarrod Santora, Jennifer Fisher, Kym Jacobson, Emily Norton, Samantha Siedlecki, Isaac Kaplan, Correigh Greene, and Stuart Munsch In: Chris J. Harvey et al. (eds.), Ecosystem status report of the California Current for 2020-21: A summary of ecosystem indicators compiled by the California Current Integrated Ecosystem Assessment Team (CCIEA), p. 8-28. U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-170.

Growth of juvenile black rockfish (Sebastes melanops) during estuarine residence Schwartzkopf, Brittany D., Lorenzo Ciannelli, John C. Garza, and Scott A. Heppell Environmental Biology of Fishes 104:851-865

Redistribution of salmon populations in the northeast Pacific Ocean in response to climate Shelton, Andrew Olaf, Genoa H. Sullaway, Eric J. Ward, Blake E. Feist, Kayleigh A. Somers, Vanessa J. Tuttle, Jordan T. Watson, and William H. Satterthwaite Fish and Fisheries 22(3):503-517

Geographic distribution of commercial fishing landings and port consolidation following ITQ implementation Speir, Cameron, and Min-Yang Lee Journal of Agricultural and Resource Economics 46(1):152-169

Efficacy of environmental DNA sampling to detect the occurrence of endangered coho salmon (Oncorhynchus kisutch) in Mediterranean-climate streams of California's central coast Spence, Brian C., David E. Rundio, Nicholas J. Demetras, and Maryna Sedoryk Environmental DNA 3(4):727-744

Selecting reliable models for total maximum daily load development: holistic protocol Sridharan, Vamsi Krishna, Nigel W.T. Quinn, Saurav Kumar, Steven C. McCutcheon, Ebrahim Ahmadisharaf, Xing Fang, Harry X. Zhang, and Andrew Parker Journal of Hydrologic Engineering 26(10):04021031

Status of lingcod (Ophiodon elongatus) along the northern U.S. west coast in 2021 Taylor, Ian G., Kelli F. Johnson, Brian J. Langseth, Andi Stephens, Laurel S. Lam, Melissa H. Monk, Alison D. Whitman, and Melissa A. Haltuch Pacific Fishery Management Council, Portland, Oregon. 254 p.

Inter-annual variability in forage fish population size structure: Comparison of selectivity of traditional vs. non-traditional sampling devices Thayer, J.A., Z. Burr, J.C. Field, R.D. Carle, and P. Warzybok Fisheries Research 234:105801 (8 p.)

A case study in connecting fisheries management challenges with models and analysis to support ecosystem-based management in the California Current Ecosystem Tommasi, Desiree, Yvonne deReynier, Howard Townsend, Chris J. Harvey, William H. Satterthwaite, Kristin N. Marshall, Isaac C. Kaplan, Stephanie Brodie, John C. Field, Elliott L. Hazen, Stefan Koenigstein, Joshua Lindsay, Kathleen Moore, Barbara Muhling, Lisa Pfeiffer, James A. Smith, Jonathan Sweeney, Brian Wells, and Michael G. Jacox Frontiers in Marine Science 8:624161 (23 p.)

Multi-scale assessment of distribution and density of procellariiform seabirds within the Northern Antarctic Peninsula marine ecosystem Warwick-Evans, V., J.A. Santora, J.J. Waggitt, and P.N. Trathan ICES Journal of Marine Science 78(4):1324-1339

Heterogeneous genetic basis of age at maturity in salmonid fishes Waters, Charles D., Anthony Clemento, Tutku Aykanat, John Carlos Garza, Kerry A. Naish, Shawn Narum, and Craig R. Primmer Molecular Ecology 30(6):1435-1456

State of the California Current 2019-2020: Back to the future with marine heatwaves? Weber, Edward D., Toby D. Auth, Simone Baumann-Pickering, Timothy R. Baumgartner, Eric P. Bjorkstedt, Steven J. Bograd, Brian J. Burke, Jose L. Cadena-Ramirez, Elizabeth A. Daly, Martin de la Cruz, Heidi Dewar, John C. Field, Jennifer L. Fisher, Ashlyn Giddings, Ralf Goericke, Eliana Gomez-Ocampo, Jose Gomez-Valdes, Elliott L. Hazen, John Hildebrand, Cheryl A. Horton, Kym C. Jacobson, Michael G. Jacox, Jaime Jahncke, Mati Kahru, Raphe M. Kudela, Bertha E. Lavaniegos, Andrew Leising, Sharon R. Melin, Luis Erasmo Miranda-Bojorquez, Cheryl A. Morgan, Catherine F. Nickels, Rachael A. Orben, Jessica M. Porquez, Elan J. Portner, Roxanne R. Robertson, Daniel L. Rudnick, Keith M. Sakuma, Jarrod A. Santora, Isaac D. Schroeder, Owyn E. Snodgrass, William J. Sydeman, Andrew R. Thompson, Sarah Ann Thompson, Jennifer S. Trickey, Josue Villegas-Mendoza, Pete Warzybok, William Watson, and Samantha M. Zeman Frontiers in Marine Science 8:709454 (23 p.)

Geochemical tools identify the origins of Chinook salmon returning to a restored creek Willmes, Malte, Emily E. Jacinto, Levi S. Lewis, Rachel A. Fichman, Zachary Bess, Gabriel Singer, Anna Steel, Peter Moyle, Andrew L. Rypel, Nann Fangue, Justin J.G. Glessner, James A. Hobbs, and Eric D. Chapman Fisheries 46(1):22-32

Experimental validation of otolith-based age and growth reconstructions across multiple life stages of a critically endangered estuarine fish Xieu, Wilson, Levi S. Lewis, Feng Zhao, Rachel A. Fichman, Malte Willmes, Tien-Chieh Hung, Luke Ellison, Troy Stevenson, Galen Tigan, Andrew A. Schultz, and James A. Hobbs PeerJ 9:e12280 (22 p.)

Factors affecting detection probability and range of transmitters and receivers designed for the Juvenile Salmon Acoustic Telemetry System Ammann, Arnold J. Environmental Biology of Fishes 103:625-634

Addressing marine and coastal governance conflicts at the interface of multiple sectors and jurisdictions Bellanger, Manuel, Cameron Speir, Fabian Blanchard, Kate Brooks, James R.A. Butler, Scott Crosson, Robert Fonner, Sophie Gourguet, Daniel S. Holland, Sakari Kuikka, Bertrand Le Gallic, Rebecca Lent, Gary D. Libecap, Douglas W. Lipton, Prateep Kumar Nayak, David Reid, Pierre Scemama, Robert Stephenson, Olivier Thebaud, and Juliette C. Young Frontiers in Marine Science 7:544440 (21 p.)

Genetic identification of blue rockfish (Sebastes mystinus) and deacon rockfish (S. diaconus) to enable life history analyses for stock assessment Bizzarro, Joseph J., Elizabeth A. Gilbert-Horvath, E.J. Dick, Aaron M. Berger, Katherine T. Schmidt, Don Pearson, Christine Petersen, Lisa A. Kautzi, Rebecca R. Miller, John C. Field, and John Carlos Garza Fishery Bulletin 118(1):37-50

Striped bass on the coast of California: a review Boughton, David A. California Fish and Wildlife 106(3):226-257

Carmel River steelhead fisheries report 2020 Boughton, David, Dereka Chargualaf, Karlee Liddy, Tim Kahles, and Haley Ohms U.S. Department of Commerce, NOAA Southwest Fisheries Science Center, Santa Cruz, California. 47 p.

Sampling plants and malacofauna in 87Sr/86Sr bioavailability studies: Implications for isoscape mapping and reconstructing of past mobility patterns Britton, Kate, Mael Le Corre, Malte Willmes, Ian Moffat, Rainer Grun, Marcello A. Mannino, Stephen Woodward, and Klervia Jaouen Frontiers in Ecology and Evolution 8:579473 (16 p.)

Poleward proliferation of an inshore squid [abstract] Burford, B., L. Wild, R. Schwarz, M. Kosma, E. Chenoweth, A. Sreenivasan, W. Gilly, R. Heintz, J. Field, H.J. Hoving, J. Straley, and M. Denny Integrative and Comparative Biology 60(supp.1):E26

EXPRESS EXpanding Pacific Research and Exploration of Submerged Systems Clarke, Elizabeth, Tom Laidig, Jeremy Potter, and Craig W. Russell In: Nicole A. Raineault and Joanne Flanders (guest eds.), New frontiers in ocean exploration: The E/V Nautilus, NOAA ship Okeanos Explorer, and R/V Falkor 2019 field season. Oceanography 33(1, supp.):83.

Using life-cycle models to identify monitoring gaps for Central Valley spring-run Chinook salmon Cordoleani, Flora, William H. Satterthwaite, Miles E. Daniels, and Matthew R. Johnson San Francisco Estuary and Watershed Science 18(4):art3 (30 p.)

The drivers of river temperatures below a large dam Daniels, Miles E., and Eric M. Danner Water Resources Research 56(5):e2019WR026751 (15 p.)

Reported vessel strike as a source of mortality of White Sturgeon in San Francisco Bay Demetras, Nicholas J., Brennan A. Helwig, and Alexander S. McHuron California Fish and Wildlife 106(1):59-65

Postrelease survival of green sturgeon (Acipenser medirostris) encountered as bycatch in the trawl fishery that targets California halibut (Paralichthys californicus), estimated by using pop-up satellite archival tags Doukakis, Phaedra, Ethan A. Mora, Susan Wang, Paul Reilly, Russ Bellmer, Kristine Lesyna, Travis Tanaka, Natnael Hamda, Mary L. Moser, Daniel L. Erickson, Jason Vestre, Jon McVeigh, Kevin Stockmann, Kristen Duncan, and Steven T. Lindley Fishery Bulletin (U.S.) 118(1):63-73

Optimising harvest strategies over multiple objectives and stakeholder preferences Dowling, Natalie A., Catherine M. Dichmont, George M. Leigh, Sean Pascoe, Rachel J. Pears, Tom Roberts, Sian Breen, Toni Cannard, Aaron Mamula, and Marc Mangel Ecological Modelling 435:109243 (23 p.)

Mapping the bacterial metabolic niche space Fahimipour, Ashkaan K., and Thilo Gross Nature Communications 11:4887 (8 p.)

Cryptic lives of conspicuous animals: Otolith chemistry chronicles life histories of coastal lagoon fishes Feyrer, Frederick, Matthew Young, Darren Fong, Karin Limburg, and Rachel Johnson Frontiers in Marine Science 7:417 (9 p.)

Krill hotspot formation and phenology in the California Current Ecosystem Fiechter, Jerome, Jarrod A. Santora, Francisco Chavez, Devon Northcott, and Monique Messie Geophysical Research Letters 47(13):e2020GL088039 (10 p.)

Thermal and habitat suitability for anadromous salmonids in the dammed and inaccessible Upper Mainstem Eel River subbasin in the Eel River Basin, California FitzGerald, Alyssa, David Boughton, Joshua Fuller, Sara John, Ben Martin, Lee Harrison, and Nate Mantua NOAA National Marine Fisheries Service, Southwest Fisheries Science Center, Santa Cruz, California. 51 p.

Fast behavioral feedbacks make ecosystems sensitive to pace and not just magnitude of anthropogenic environmental change Gil, Michael A., Marissa L. Baskett, Stephan B. Munch, and Andrew M. Hein Proceedings of the National Academy of Sciences of the United States of America 117(41):25580-25589

Circularity in fisheries data weakens real world prediction Giron-Nava, Alfredo, Stephan B. Munch, Andrew F. Johnson, Ethan Deyle, Chase C. James, Erik Saberski, Gerald M. Pao, Octavio Aburto-Oropeza, George Sugihara Scientific Reports 10:6977 (6 p.)

Modern models of trophic meta-communities Gross, Thilo, Korinna T. Allhoff, Bernd Blasius, Ulrich Brose, Barbara Drossel, Ashkaan K. Fahimipour, Christian Guill, Justin D. Yeakel, and Fanqi Zeng Philosphical Transactions of the Royal Society B 375(1814):20190455 (12 p.)

Assessing the potential for spectrally based remote sensing of salmon spawning locations Harrison, Lee R., Carl J. Legleiter, Brandon T. Overstreet, Tom W. Bell, and John Hannon River Research and Applications 36(8):1618-1632

Ecosystem status report of the California Current for 2019-2020: A summary of ecosystem indicators compiled by the California Current Integrated Ecosystem Assessment Team (CCIEA) Harvey, Chris, Newell (Toby) Garfield, Gregory Williams, Nick Tolimieri, Kelly Andrews, Katie Barnas, Eric Bjorkstedt, Steven Bograd, Jerry Borchert, Caren Braby, Richard Brodeur, Brian Burke, Jason Cope, Audrey Coyne, David Demer, Lynn deWitt, John Field, Jennifer Fisher, Peter Frey, Thomas Good, Christina Grant, Correigh Greene, Elliott Hazen, Daniel Holland, Matthew Hunter, Kym Jacobson, Michael Jacox, Jaime Jahncke, Christy Juhasz, Isaac Kaplan, Stephen Kasperski, Su Kim, Dan Lawson, Andrew Leising, Alex Manderson, Nate Mantua, Sharon Melin, Rebecca Miller, Stephanie Moore, Cheryl Morgan, Barbara Muhling, Stuart Munsch, Karma Norman, Julia Parrish, Amanda Phillips, Roxanne Robertson, Dan Rudnick, Keith Sakuma, Jameal Samhouri, Jarrod Santora, Isaac Schroeder, Samantha Siedlecki, Kayleigh Somers, Beckye Stanton, Kevin Stierhoff, William Sydeman, Andrew Thompson, Nick Tolimieri, Duy Trong, Pete Warzybok, Curt Whitmire, Brian Wells, Margaret Williams, Thomas Williams, Jeannette Zamon, Samantha Zeman, Vanessa Zubkousky-White, and Juan Zwolinski U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-160. 80 p.

California Current Integrated Ecosystem Assessment (CCIEA): California Current Ecosystem status report, 2020 Harvey, Chris, Toby Garfield, Greg Williams, and Nick Tolimieri (eds.) A report of the NOAA CCIEA Team to the Pacific Fishery Management Council. 77 p.

Information limitation and the dynamics of coupled ecological systems Hein, Andrew M., and Benjamin T. Martin Nature Ecology and Evolution 4(1):82-90

An algorithmic approach to natural behavior Hein, Andrew M., Douglas L. Altshuler, David E. Cade, James C. Liao, Benjamin T. Martin, and Graham K. Taylor Current Biology 30(11):R663-R675

Deep-sea coral and sponge taxa increase demersal fish diversity and the probability of fish presence Henderson, Mark J., David D. Huff, and Mary M. Yoklavich Frontiers in Marine Science 7:593844 (19 p.)

Acute bottlenecks to the survival of juvenile Pygoscelis penguins occur immediately after fledging Hinke, Jefferson T., George M. Watters, Christian S. Reiss, Jarrod A. Santora, and M. Mercedes Santos Biology Letters 16(12):20200645 (6 p.)

Mobility and its sensitivity to fitness differences determine consumer-resource distributions Jiao, Jing, Louise Riotte-Lambert, Sergei S. Pilyugin, Michael A. Gil, and Craig W. Osenberg Royal Society Open Science 7:200247 (11 p.)

Lifetime chronicles of selenium exposure linked to deformities in an imperiled migratory fish Johnson, Rachel Cathleen, A. Robin Stewart, Karin E. Limburg, Rong Huang, Dennis Cocherell, and Frederick Feyrer Environmental Science and Technology 54(5):2892-2901

Klamath River fall Chinook salmon age-specific escapement, river harvest, and run size estimates, 2019 run Klamath River Technical Team Klamath River Technical Team. 21 p.

Ocean abundance projections and prospective harvest levels for Klamath River fall Chinook, 2020 season Klamath River Technical Team Klamath River Technical Team. 30 p.

Ancestral genetic variation in phenotypic plasticity underlies rapid evolutionary changes in resurrected populations of waterfleas Landy, J. Alex, Alixander Oschmann, Stephan B. Munch, and Matthew R. Walsh Proceedings of the National Academy of Sciences of the United States of America 117(51):32535-32544

Thermal transgenerational effects remain after two generations Lee, Who-Seung, Santiago Salinas, Young-Rog Lee, Jo Anne Siskidis, Marc Mangel, and Stephan B. Munch Ecology and Evolution 10(20):11296-11303

Disease in Central Valley salmon: status and lessons from other systems Lehman, Brendan M., Rachel C. Johnson, Mark Adkison, Oliver T. Burgess, Richard E. Connon, Nann A. Fangue, J. Scott Foott, Sascha L. Hallett, Beatriz Martinez-Lopez, Kristina M. Miller, Maureen K. Purcell, Nicholas A. Som, Pablo Valdes Donoso, and Alison L. Collins San Francisco Estuary and Watershed Science 18(3):2 (31 p.)

Oversummer growth and survival of juvenile coho salmon (Oncorhynchus kisutch) across a natural gradient of stream water temperature and prey availability: an in situ enclosure experiment Lusardi, Robert A., Bruce G. Hammock, Carson A. Jeffres, Randy A. Dahlgren, and Joseph D. Kiernan Canadian Journal of Fisheries and Aquatic Sciences 77(2):413-424

Matching Vessel Monitoring System data to trawl logbook and fish ticket data for the Pacific groundfish fishery Mamula, Aaron, Alice Thomas-Smyth, Cameron Speir, Rosemary Kosaka, and Don Pearson U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-623. 76 p.

The biophysical basis of thermal tolerance in fish eggs Martin, Benjamin T., Peter N. Dudley, Neosha S. Kashef, David M. Stafford, William J. Reeder, Daniele Tonina, Annelise M. Del Rio, J. Scott Foott, and Eric M. Danner Proceedings of the Royal Society B 287(1937):20201550 (9 p.)

Diet segregation in Adelie penguins: some individuals attempt to overcome colony-induced and annual foraging challenges Massaro, Melanie, David G. Ainley, Jarrod A. Santora, Petra Quillfeldt, Amelie Lescroel, Amy Whitehead, Arvind Varsani, Grant Ballard, and Phil O'B. Lyver Marine Ecology Progress Series 645:205-218

Effects of hypoxia on the behavior and physiology of kelp forest fishes Mattiasen, Evan G., Neosha S. Kashef, David M. Stafford, Cheryl A. Logan, Susan M. Sogard, Eric P. Bjorkstedt, and Scott L. Hamilton Global Change Biology 26(6):3498-3511

Limitations of active removal to manage predatory fish populations Michel, Cyril J., Joseph M. Smith, Brendan M. Lehman, Nicholas J. Demetras, David D. Huff, Patricia L. Brandes, Joshua A. Israel, Thomas P. Quinn, and Sean A. Hayes North American Journal of Fisheries Management 40(1):3-16

Fish predation on a landscape scale Michel, Cyril J., Mark J. Henderson, Christopher M. Loomis, Joseph M. Smith, Nicholas J. Demetras, Ilysa S. Iglesias, Brendan M. Lehman, and David D. Huff Ecosphere 11(6):e03168 (18 p.)

Bioavailable soil and rock strontium isotope data from Israel Moffat, Ian, Rachel Rudd, Malte Willmes, Graham Mortimer, Les Kinsley, Linda McMorrow, Richard Armstrong, Maxime Aubert, and Rainer Grun Earth System Science Data 12:3641-3652

NMFS Southwest Fisheries Science Center: Draft agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Monk, Melissa (ed.), John Field, Tom Laidig, Nick Wegner, and William Watson In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee, p. 279-294. Pacific States Marine Fisheries Commission.

Frequently asked questions about nonlinear dynamics and empirical dynamic modelling Munch, Stephan B., Antoine Brias, George Sugihara, and Tanya L. Rogers ICES Journal of Marine Science 77(4):1463-1479

Science for integrative management of a diadromous fish stock: interdependencies of fisheries, flow, and habitat restoration Munsch, Stuart H., Correigh M. Greene, Rachel C. Johnson, William H. Satterthwaite, Hiroo Imaki, Patricia L. Brandes, and Michael R. O'Farrell Canadian Journal of Fisheries and Aquatic Sciences 77(9):1487-1504

Potential for ecological nonlinearities and thresholds to inform Pacific salmon management Munsch, Stuart H., Kelly S. Andrews, Lisa G. Crozier, Robert Fonner, Jennifer L. Gosselin, Correigh M. Greene, Chris J. Harvey, Jessica I. Lundin, George R. Pess, Jameal F. Samhouri, and William H. Satterthwaite Ecosphere 11(12):e03302 (21 p.)

Enhanced acoustic tagging, analysis, and real-time monitoring of wild and hatchery salmonids in the Sacramento River Valley: 2019 annual report Notch, J., R. Robinson, T. Pham, R. Logston, A. McHuron, A. Ammann, and C. Michel Report prepared by University of California Santa Cruz, Fisheries Collaborative Program (NOAA/UCSC) for the U.S. Bureau of Reclamation under contract USDI/BOR#R18AC00039. 215 p.

Outmigration survival of wild Chinook salmon smolts through the Sacramento River during historic drought and high water conditions Notch, Jeremy J., Alex S. McHuron, Cyril J. Michel, Flora Cordoleani, Matt Johnson, Mark J. Henderon, and Arnold J. Ammann Environmental Biology of Fishes 103:561-576

Recent declines in salmon body size impact ecosystems and fisheries Oke, K.B., C.J. Cunningham, P.A.H. Westley, M.L. Baskett, S.M. Carlson, J. Clark, A.P. Hendry, V.A. Karatayev, N.W. Kendall, J. Kibele, H.K. Kindsvater, K.M. Kobayashi, B. Lewis, S. Munch, J.D. Reynolds, G.K. Vick, and E.P. Palkovacs Nature Communications 11:4155 (13 p.)

Review of 2019 ocean salmon fisheries: Stock assessment and fishery evaluation document for the Pacific Coast Salmon Fishery Management Plan Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 337 p.

Preseason report I: Stock abundance analysis and environmental assessment Part 1 for 2020 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 134 p.

Preseason report II: Proposed alternatives and environmental assessment Part 2 for 2020 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 85 p.

Preseason report III: Council adopted management measures and environmental assessment Part 3 for 2020 ocean salmon fishery regulations Pacific Fishery Management Council (Salmon Technical Team) Pacific Fishery Management Council, Portland, Oregon. 51 p.

Odors from marine plastic debris elicit foraging behavior in sea turtles Pfaller, Joseph B., Kayla M. Goforth, Michael A. Gil, Matthew S. Savoca, and Kenneth J. Lohmann Current Biology 30(5):R213-R214

Decoding collective communications using information theory tools Pilkiewicz, K.R., B.H. Lemasson, M.A. Rowland, A. Hein, J. Sun, A. Berdahl, M.L. Mayo, J. Moehlis, M. Porfiri, E. Fernandez-Juricic, S. Garnier, E.M. Bollt, J.M. Carlson, M.R. Tarampi, K.L. Macuga, L. Rossi, and C.-C. Shen Journal of the Royal Society Interface 17(164):20190563 (16 p.)

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