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SWFSC Publications Search

The SWFSC publications website serves as an archival repository of documents published and/or authored by SWFSC staff and funded partners. As a repository, the SWFSC publications website retains documents in their original published format to ensure public access to scientific information.

       

8,906 Search Result(s)



Observing change in pelagic animals as sampling methods shift: the case of Antarctic krill

Hill, Simeon L., Angus Atkinson, Javier A. Arata, Anna Belcher, Susan Bengtson Nash, Kim S. Bernard, Alison Cleary, John A. Conroy, Ryan Driscoll, Sophie Fielding, Hauke Flores, Jaume Forcada, Svenja Halfter, Jefferson T. Hinke, Luis Huckstadt, Nadine M. Johnston, Mary Kane, So Kawaguchi, Bjorn A. Krafft, Lucas Kruger, Hyoung Sul La, Cecilia M. Liszka, Bettina Meyer, Eugene J. Murphy, Evgeny A. Pakhomov, Frances Perry, Andrea Pinones, Michael J. Polito, Keith Reid, Christian Reiss, Emilce Rombola, Ryan A. Saunders, Katrin Schmidt, Zephyr T. Sylvester, Akinori Takahashi, Geraint A. Tarling, Phil N. Trathan, Devi Veytia, George M. Watters, Jose C. Xavier, and Guang Yang
2024
Frontiers in Marine Science 11:1307402 (20 p.)
https://doi.org/10.3389/fmars.2024.1307402
Observing change in pelagic animals as sampling methods shift: the case of Antarctic krill Hill, Simeon L., Angus Atkinson, Javier A. Arata, Anna Belcher, Susan Bengtson Nash, Kim S. Bernard, Alison Cleary, John A. Conroy, Ryan Driscoll, Sophie Fielding, Hauke Flores, Jaume Forcada, Svenja Halfter, Jefferson T. Hinke, Luis Huckstadt, Nadine M. Johnston, Mary Kane, So Kawaguchi, Bjorn A. Krafft, Lucas Kruger, Hyoung Sul La, Cecilia M. Liszka, Bettina Meyer, Eugene J. Murphy, Evgeny A. Pakhomov, Frances Perry, Andrea Pinones, Michael J. Polito, Keith Reid, Christian Reiss, Emilce Rombola, Ryan A. Saunders, Katrin Schmidt, Zephyr T. Sylvester, Akinori Takahashi, Geraint A. Tarling, Phil N. Trathan, Devi Veytia, George M. Watters, Jose C. Xavier, and Guang Yang Frontiers in Marine Science 11:1307402 (20 p.)
2024Hill
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Rapid inference of larval fish recruitment potential from size spectrum models

Hinchliffe, Charles, Hayden T. Schilling, Pierre Pepin, Fonti Kar, Daniel S. Falster, and Iain M. Suthers
2024
Canadian Journal of Fisheries and Aquatic Sciences 81(11):1581-1593
https://doi.org/10.1139/cjfas-2024-0067
Rapid inference of larval fish recruitment potential from size spectrum models Hinchliffe, Charles, Hayden T. Schilling, Pierre Pepin, Fonti Kar, Daniel S. Falster, and Iain M. Suthers Canadian Journal of Fisheries and Aquatic Sciences 81(11):1581-1593
2024Hinchliffe
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Seventy years of diminishing biocomplexity of California Central Valley hatchery steelhead, Oncorhynchus mykiss

Huber, Eric R., Rachael E. Ryan, Rachel C. Johnson, Anna M. Sturrock, Robert A. Lusardi, and Stephanie M. Carlson
2024
Canadian Journal of Fisheries and Aquatic Sciences 81(4):355-367
https://doi.org/10.1139/cjfas-2023-0077
Seventy years of diminishing biocomplexity of California Central Valley hatchery steelhead, Oncorhynchus mykiss Huber, Eric R., Rachael E. Ryan, Rachel C. Johnson, Anna M. Sturrock, Robert A. Lusardi, and Stephanie M. Carlson Canadian Journal of Fisheries and Aquatic Sciences 81(4):355-367
2024Huber
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Remnant salmon life history diversity rediscovered in a highly compressed habitat

Hugentobler, Sara A., Anna M. Sturrock, Malte Willmes, Tasha Q. Thompson, Rachel C. Johnson, Flora Cordoleani, Natalie J. Stauffer-Olsen, George Whitman, and Mariah H. Meek
2024
Evolutionary Applications 17(7):e13741 (10 p.)
https://doi.org/10.1111/eva.13741
Remnant salmon life history diversity rediscovered in a highly compressed habitat Hugentobler, Sara A., Anna M. Sturrock, Malte Willmes, Tasha Q. Thompson, Rachel C. Johnson, Flora Cordoleani, Natalie J. Stauffer-Olsen, George Whitman, and Mariah H. Meek Evolutionary Applications 17(7):e13741 (10 p.)
2024Hugentobler
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Exploring connections between mesopelagic ecosystems, epipelagic predators, and a changing ocean climate the the California Current

Iglesias, Ilysa S.
2024
Ph.D. dissertation, University of California, Santa Cruz. 169 p.
Exploring connections between mesopelagic ecosystems, epipelagic predators, and a changing ocean climate the the California Current Iglesias, Ilysa S. Ph.D. dissertation, University of California, Santa Cruz. 169 p.
2024Iglesias
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Vertical distribution of mesopelagic fishes deepens during marine heatwave in the California Current

Iglesias, Ilysa S., Jerome Fiechter, Jarrod A. Santora, and John C. Field
2024
ICES Journal of Marine Science 81(9):1837-1849
https://doi.org/10.1093/icesjms/fsae129
Vertical distribution of mesopelagic fishes deepens during marine heatwave in the California Current Iglesias, Ilysa S., Jerome Fiechter, Jarrod A. Santora, and John C. Field ICES Journal of Marine Science 81(9):1837-1849
2024Iglesias2
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Genetic characteristics of loggerhead turtles in the coastal corridor of the North West Pacific, around the Cape Muroto, Japan

Ishihara, Takashi, Naoki Kamezaki, Saya Hirai, Yoshimasa Matsuzawa, Tomoko Hamabata, Asuka Ishizaki, and Peter H. Dutton
2024
Frontiers in Marine Science 11:1303553 (9 p.)
https://doi.org/10.3389/fmars.2024.1303553
Genetic characteristics of loggerhead turtles in the coastal corridor of the North West Pacific, around the Cape Muroto, Japan Ishihara, Takashi, Naoki Kamezaki, Saya Hirai, Yoshimasa Matsuzawa, Tomoko Hamabata, Asuka Ishizaki, and Peter H. Dutton Frontiers in Marine Science 11:1303553 (9 p.)
2024Ishihara
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Linking upwelling dynamics and subsurface nutrients to projected productivity changes in the California Current System

Jacox, Michael G., Steven J. Bograd, Jerome Fiechter, Mercedes Pozo Buil, Michael Alexander, Dillon Amaya, Nathali Cordero Quiros, Hui Ding, and Ryan R. Rykaczewski
2024
Geophysical Research Letters 51(10):e2023GL108096 (9 p.)
https://doi.org/10.1029/2023GL108096
Linking upwelling dynamics and subsurface nutrients to projected productivity changes in the California Current System Jacox, Michael G., Steven J. Bograd, Jerome Fiechter, Mercedes Pozo Buil, Michael Alexander, Dillon Amaya, Nathali Cordero Quiros, Hui Ding, and Ryan R. Rykaczewski Geophysical Research Letters 51(10):e2023GL108096 (9 p.)
2024Jacox
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Vertical structure of Caribbean deep-reef fishes from the altiphotic to deep-sea boundary

Jacquemont, Juliette, Simon J. Brandl, Emily P. McFarland, Joachim Claudet, Carole C. Baldwin, Jenna Barrett, and Luke Tornabene
2024
Scientific Reports 14:19489 (16 p.)
https://doi.org/10.1038/s41598-024-69774-w
Vertical structure of Caribbean deep-reef fishes from the altiphotic to deep-sea boundary Jacquemont, Juliette, Simon J. Brandl, Emily P. McFarland, Joachim Claudet, Carole C. Baldwin, Jenna Barrett, and Luke Tornabene Scientific Reports 14:19489 (16 p.)
2024Jacquemont
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Validation of periodicity of growth band formation in Pacific Sardine (Sardinops sagax) from a captive growth experiment

James, Kelsey C., Emmanis Dorval, and Brad E. Erisman
2024
Marine Biology 171(5):105 (13 p.)
https://doi.org/10.1007/s00227-024-04425-2
Validation of periodicity of growth band formation in Pacific Sardine (Sardinops sagax) from a captive growth experiment James, Kelsey C., Emmanis Dorval, and Brad E. Erisman Marine Biology 171(5):105 (13 p.)
2024James
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Characterization of incremental markings in the sagittal otolith of the Pacific sardine (Sardinops sagax) using different imaging modalities

James, Kelsey C., Uwe Kierdorf, Victoria Cooley, Viktor Nikitin, Stuart R. Stock, and Horst Kierdorf
2024
Minerals 14(7):705 (20 p.)
https://doi.org/10.3390/min14070705
Characterization of incremental markings in the sagittal otolith of the Pacific sardine (Sardinops sagax) using different imaging modalities James, Kelsey C., Uwe Kierdorf, Victoria Cooley, Viktor Nikitin, Stuart R. Stock, and Horst Kierdorf Minerals 14(7):705 (20 p.)
2024James2
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The long-beaked common dolphin of the eastern Pacific Ocean: Taxonomic status and redescription of Delphinus bairdii

Jefferson, Thomas A., Frederick I. Archer, and Kelly M. Robertson
2024
Marine Mammal Science 40(4):e13133 (37 p.)
https://doi.org/10.1111/mms.13133
The long-beaked common dolphin of the eastern Pacific Ocean: Taxonomic status and redescription of Delphinus bairdii Jefferson, Thomas A., Frederick I. Archer, and Kelly M. Robertson Marine Mammal Science 40(4):e13133 (37 p.)
2024Jefferson
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Participation in collaborative fisheries research improves the perceptions of recreational anglers towards marine protected areas

Johnston, Erin M., Grant T. Waltz, Rosamaria Kosaka, Ellie M. Brauer, Shelby L. Ziegler, Erica T. Jarvis Mason, Hunter S. Glanz, Lauren Zaragoza, Allison N. Kellum, Rachel O. Brooks, Brice X. Semmens, Christopher J. Honeyman, Jennifer E. Caselle, Lyall F. Bellquist, Sadie L. Small, Steven G. Morgan, Timothy J. Mulligan, Connor L. Coscino, Jay M. Staton, Richard M. Starr, Scott L. Hamilton, Benjamin I Ruttenberg, and Dean E. Wendt
2024
Frontiers in Marine Science 11:1330498 (12 p.)
https://doi.org/10.3389/fmars.2024.1330498
Participation in collaborative fisheries research improves the perceptions of recreational anglers towards marine protected areas Johnston, Erin M., Grant T. Waltz, Rosamaria Kosaka, Ellie M. Brauer, Shelby L. Ziegler, Erica T. Jarvis Mason, Hunter S. Glanz, Lauren Zaragoza, Allison N. Kellum, Rachel O. Brooks, Brice X. Semmens, Christopher J. Honeyman, Jennifer E. Caselle, Lyall F. Bellquist, Sadie L. Small, Steven G. Morgan, Timothy J. Mulligan, Connor L. Coscino, Jay M. Staton, Richard M. Starr, Scott L. Hamilton, Benjamin I Ruttenberg, and Dean E. Wendt Frontiers in Marine Science 11:1330498 (12 p.)
2024Johnston
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Physical and biogeochemical phenology of coastal upwelling in the California Current System

Jorgensen, Ellen M., Elliott L. Hazen, Michael G. Jacox, Mercedes Pozo Buil, Isaac Schroeder, and Steven J. Bograd
2024
Geophysical Research Letters 51(7):e2024GL108194 (7 p.)
https://doi.org/10.1029/2024GL108194
Physical and biogeochemical phenology of coastal upwelling in the California Current System Jorgensen, Ellen M., Elliott L. Hazen, Michael G. Jacox, Mercedes Pozo Buil, Isaac Schroeder, and Steven J. Bograd Geophysical Research Letters 51(7):e2024GL108194 (7 p.)
2024Jorgensen
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Otolith microchemistry combined with genetics reveal patterns of straying and population connectivity in anadromous brown trout (Salmo trutta)

Kallo, Kristi, Kim Birnie-Gauvin, Henrik Baktoft, Dorte Bekkevold, Charles Lesher, Peter Gronkjaer, Gry H. Barfod, Rachel Johnson, George Whitman, Malte Willmes, Justin Glessner, and Kim Aarestrup
2024
Ecology of Freshwater Fish 33(2):e12760 (13 p.)
https://doi.org/10.1111/eff.12760
Otolith microchemistry combined with genetics reveal patterns of straying and population connectivity in anadromous brown trout (Salmo trutta) Kallo, Kristi, Kim Birnie-Gauvin, Henrik Baktoft, Dorte Bekkevold, Charles Lesher, Peter Gronkjaer, Gry H. Barfod, Rachel Johnson, George Whitman, Malte Willmes, Justin Glessner, and Kim Aarestrup Ecology of Freshwater Fish 33(2):e12760 (13 p.)
2024Kallo
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Photo-identification and satellite telemetry connect southern right whales from South Georgia Island (Islas Georgias del Sur) with multiple feeding and calving grounds in the southwest Atlantic

Kennedy, Amy S. Emma L. Carroll, Alexandre N. Zerbini, C. Scott Baker, Manuela Bassoi, Nazarena A. Beretta, Danielle L. Buss, Susannah Calderan, Ted Cheeseman, Martin A. Collins, Paula Costa-Urrutia, Paul Ensor, Karina Groch, Russell Leaper, Paula Olson, Cecilia Passadore, Federico G. Riet-Sapriza, Els Vermeulen, Florencia Vilches, Andrew G. Wood, and Jennifer A. Jackson
2024
Marine Mammal Science 40(2):e13089 (19 p.)
https://doi.org/10.1111/mms.13089
Photo-identification and satellite telemetry connect southern right whales from South Georgia Island (Islas Georgias del Sur) with multiple feeding and calving grounds in the southwest Atlantic Kennedy, Amy S. Emma L. Carroll, Alexandre N. Zerbini, C. Scott Baker, Manuela Bassoi, Nazarena A. Beretta, Danielle L. Buss, Susannah Calderan, Ted Cheeseman, Martin A. Collins, Paula Costa-Urrutia, Paul Ensor, Karina Groch, Russell Leaper, Paula Olson, Cecilia Passadore, Federico G. Riet-Sapriza, Els Vermeulen, Florencia Vilches, Andrew G. Wood, and Jennifer A. Jackson Marine Mammal Science 40(2):e13089 (19 p.)
2024Kennedy
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Genetic divergence and one-way gene flow influence contemporary evolution and ecology of a partially migratory fish

Kobayashi, Katie M., Rosealea M. Bond, Kerry Reid, J. Carlos Garza, Joseph D. Kiernan, and Eric P. Palkovacs
2024
Evolutionary Applications 17(6):e13712 (16 p.)
https://doi.org/10.1111/eva.13712
Genetic divergence and one-way gene flow influence contemporary evolution and ecology of a partially migratory fish Kobayashi, Katie M., Rosealea M. Bond, Kerry Reid, J. Carlos Garza, Joseph D. Kiernan, and Eric P. Palkovacs Evolutionary Applications 17(6):e13712 (16 p.)
2024Kobayashi
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Evaluating threats to South Shetland Antarctic fur seals amidst population collapse

Krause, Douglas J., Robert L. Brownell Jr., Carolina A. Bonin, Samuel M. Woodman, Douglas Shaftel, and George M. Watters
2024
Mammal Review 54(1):30-46
https://doi.org/10.1111/mam.12327
Evaluating threats to South Shetland Antarctic fur seals amidst population collapse Krause, Douglas J., Robert L. Brownell Jr., Carolina A. Bonin, Samuel M. Woodman, Douglas Shaftel, and George M. Watters Mammal Review 54(1):30-46
2024Krause
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Assessment of the Pacific sardine resource (Sardinops sagax) in 2024 for U.S. management in 2024-2025

Kuriyama, Peter T., Caitlin Allen Akselrud, Juan P. Zwolinski, and Kevin T. Hill
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-698. 165 p.
https://doi.org/10.25923/jyw3-ys65
Assessment of the Pacific sardine resource (Sardinops sagax) in 2024 for U.S. management in 2024-2025 Kuriyama, Peter T., Caitlin Allen Akselrud, Juan P. Zwolinski, and Kevin T. Hill U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-698. 165 p.
2024Kuriyama
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Trophic level influences larval Shortbelly Rockfish development

Kwan, Garfield T., Kamran A. Walsh, Andrew R. Thompson, Noah J. Ben-Aderet, H. William Fennie, Brice X. Semmens, and Rasmus Swalethorp
2024
Marine and Coastal Fisheries 16(6):e10319 (10 p.)
https://doi.org/10.1002/mcf2.10319
Trophic level influences larval Shortbelly Rockfish development Kwan, Garfield T., Kamran A. Walsh, Andrew R. Thompson, Noah J. Ben-Aderet, H. William Fennie, Brice X. Semmens, and Rasmus Swalethorp Marine and Coastal Fisheries 16(6):e10319 (10 p.)
2024Kwan
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Eastern North Pacific gray whale calf production 1994-2024

Lang, Aimee, Tomo Eguchi, and David Weller
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-707. 12 p.
https://doi.org/10.25923/j01w-ja77
Eastern North Pacific gray whale calf production 1994-2024 Lang, Aimee, Tomo Eguchi, and David Weller U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-707. 12 p.
2024Lang
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Ancestry and genetic structure of resident and anadromous rainbow trout (Oncorhynchus mykiss) in Argentina

Lazari, Carolina, Carla Riva-Rossi, Javier Ciancio, Miguel Pascual, Anthony J. Clemento, Devon E. Pearse, and John Carlos Garza
2024
Journal of Fish Biology 104(6):1972-1989
https://doi.org/10.1111/jfb.15722
Ancestry and genetic structure of resident and anadromous rainbow trout (Oncorhynchus mykiss) in Argentina Lazari, Carolina, Carla Riva-Rossi, Javier Ciancio, Miguel Pascual, Anthony J. Clemento, Devon E. Pearse, and John Carlos Garza Journal of Fish Biology 104(6):1972-1989
2024Lazari
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Good practices for estimating and using length-at-age in integrated stock assessments

Lee, HuiHua, Mark N. Maunder, and Kevin R. Piner
2024
Fisheries Research 270:106883
https://doi.org/10.1016/j.fishres.2023.106883
Good practices for estimating and using length-at-age in integrated stock assessments Lee, HuiHua, Mark N. Maunder, and Kevin R. Piner Fisheries Research 270:106883
2024Lee
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Evaluating the potential for efficient, UAS-based reach-scale mapping of river channel bathymetry from multispectral images

Legleiter, Carl J., and Lee R. Harrison
2024
Frontiers in Remote Sensing 5:1305991 (16 p.)
https://doi.org/10.3389/frsen.2024.1305991
Evaluating the potential for efficient, UAS-based reach-scale mapping of river channel bathymetry from multispectral images Legleiter, Carl J., and Lee R. Harrison Frontiers in Remote Sensing 5:1305991 (16 p.)
2024Legleiter
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A two-dimensional, reach-scale implementation of space-time image velocimetry (STIV) and comparison to particle image velocimetry (PIV)

Legleiter, Carl J., Paul J. Kinzel, Frank L. Engel, Lee R. Harrison, and Gregory Hewitt
2024
Earth Surface Processes and Landforms 49(10):3093-3114
https://doi.org/10.1002/esp.5878
A two-dimensional, reach-scale implementation of space-time image velocimetry (STIV) and comparison to particle image velocimetry (PIV) Legleiter, Carl J., Paul J. Kinzel, Frank L. Engel, Lee R. Harrison, and Gregory Hewitt Earth Surface Processes and Landforms 49(10):3093-3114
2024Legleiter2
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Introduction

Leis, Jeffrey M., William Watson, Bruce C. Mundy, and Peter Konstantinidis
2024
In: Jeffrey M. Leis, William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.), Early life history and biology of marine fishes: research inspired by the work of H. Geoffrey Moser, p. 1-2. U.S. Department of Commerce, NOAA Professional Paper NMFS 24.
https://doi.org/10.7755/PP.24.1
Introduction Leis, Jeffrey M., William Watson, Bruce C. Mundy, and Peter Konstantinidis In: Jeffrey M. Leis, William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.), Early life history and biology of marine fishes: research inspired by the work of H. Geoffrey Moser, p. 1-2. U.S. Department of Commerce, NOAA Professional Paper NMFS 24.
2024Leis2
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Early life history and biology of marine fishes: Research inspired by the work of H. Geoffrey Moser

Leis, Jeffrey M., William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.)
2024
U.S. Department of Commerce, NOAA Professional Paper NMFS 24. 286 p.
https://doi.org/10.7755/PP.24
Early life history and biology of marine fishes: Research inspired by the work of H. Geoffrey Moser Leis, Jeffrey M., William Watson, Bruce C. Mundy, and Peter Konstantinidis (eds.) U.S. Department of Commerce, NOAA Professional Paper NMFS 24. 286 p.
2024Leis1
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Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers

Lennox, Robert J., Frederick G. Whoriskey, Pieterjan Verhelst, Christopher S. Vandergoot, Marc Soria, Jan Reubens, Erin L. Rechisky, Michael Power, Taryn Murray, Ingeborg Mulder, James L. Markham, Susan K. Lowerre-Barbieri, Steven T. Lindley, Nathan A. Knott, Steven T. Kessel, Sara Iverson, Charlie Huveneers, Maike Heidemeyer, Robert Harcourt, Lucas P. Griffin, Claudie Friess, Alexander Filous, Lachlan C. Fetterplace, Andy J. Danylchuk, Ryan Daly, Paul Cowley, Steven J. Cooke, Elpis J. Chavez, Antonin Blaison, and Kim Whoriskey
2024
Ecography 2024(1):e06801 (16 p.)
https://doi.org/10.1111/ecog.06801
Globally coordinated acoustic aquatic animal tracking reveals unexpected, ecologically important movements across oceans, lakes and rivers Lennox, Robert J., Frederick G. Whoriskey, Pieterjan Verhelst, Christopher S. Vandergoot, Marc Soria, Jan Reubens, Erin L. Rechisky, Michael Power, Taryn Murray, Ingeborg Mulder, James L. Markham, Susan K. Lowerre-Barbieri, Steven T. Lindley, Nathan A. Knott, Steven T. Kessel, Sara Iverson, Charlie Huveneers, Maike Heidemeyer, Robert Harcourt, Lucas P. Griffin, Claudie Friess, Alexander Filous, Lachlan C. Fetterplace, Andy J. Danylchuk, Ryan Daly, Paul Cowley, Steven J. Cooke, Elpis J. Chavez, Antonin Blaison, and Kim Whoriskey Ecography 2024(1):e06801 (16 p.)
2024Lennox
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Report of Working Group 41 on Marine Ecosystem Services in the North Pacific

Lew, Daniel K., Gisele Magnusson, and Kevin D. Ray (eds.)
2024
North Pacific Marine Science Organization, PICES Scientific Report no. 65 (247 p.)
Report of Working Group 41 on Marine Ecosystem Services in the North Pacific Lew, Daniel K., Gisele Magnusson, and Kevin D. Ray (eds.) North Pacific Marine Science Organization, PICES Scientific Report no. 65 (247 p.)
2024Lew
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Divergent responses of highly migratory species to climate change in the California Current

Lezama-Ochoa, Nerea, Stephanie Brodie, Heather Welch, Michael G. Jacox, Mercedes Pozo Buil, Jerome Fiechter, Megan Cimino, Barbara Muhling, Heidi Dewar, Elizabeth A. Becker, Karin A. Forney, Daniel Costa, Scott R. Benson, Nima Farchadi, Camrin Braun, Rebecca Lewison, Steven Bograd, and Elliott L. Hazen
2024
Diversity and Distributions 30(2):e13800 (14 p.)
https://doi.org/10.1111/ddi.13800
Divergent responses of highly migratory species to climate change in the California Current Lezama-Ochoa, Nerea, Stephanie Brodie, Heather Welch, Michael G. Jacox, Mercedes Pozo Buil, Jerome Fiechter, Megan Cimino, Barbara Muhling, Heidi Dewar, Elizabeth A. Becker, Karin A. Forney, Daniel Costa, Scott R. Benson, Nima Farchadi, Camrin Braun, Rebecca Lewison, Steven Bograd, and Elliott L. Hazen Diversity and Distributions 30(2):e13800 (14 p.)
2024LezamaOchoa
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Genetic data reveal wintering ground affiliation of humpback whales from the Mexican Central Pacific

Llamas-Gonzalez, Myriam, Christian D. Ortega-Ortiz, Luis M. Enriquez-Paredes, Ursula A. Gonzalez-Peral, Eric Bautista-Guerrero, and Karen K. Martien
2024
Marine Mammal Science 40(1):54-72
https://doi.org/10.1111/mms.13053
Genetic data reveal wintering ground affiliation of humpback whales from the Mexican Central Pacific Llamas-Gonzalez, Myriam, Christian D. Ortega-Ortiz, Luis M. Enriquez-Paredes, Ursula A. Gonzalez-Peral, Eric Bautista-Guerrero, and Karen K. Martien Marine Mammal Science 40(1):54-72
2024LlamasGonzalez
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Crossing the Pacific: Genomics reveals the presence of Japanese Sardine (Sardinops melanosticta) in the California Current Large Marine Ecosystem

Longo, Gary C., Jeremiah J. Minich, Nicholas Allsing, Kelsey James, Ella S. Adams-Herrmann, Wes Larson, Nolan Hartwick, Tiffany Duong, Barbara Muhling, Todd P. Michael, and Matthew T. Craig
2024
Molecular Ecology 33(22):e17561 (13 p.)
https://doi.org/10.1111/mec.17561
Crossing the Pacific: Genomics reveals the presence of Japanese Sardine (Sardinops melanosticta) in the California Current Large Marine Ecosystem Longo, Gary C., Jeremiah J. Minich, Nicholas Allsing, Kelsey James, Ella S. Adams-Herrmann, Wes Larson, Nolan Hartwick, Tiffany Duong, Barbara Muhling, Todd P. Michael, and Matthew T. Craig Molecular Ecology 33(22):e17561 (13 p.)
2024Longo
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Smaller body size under warming is not due to gill-oxygen limitation in a cold-water salmonid

Lonthair, Joshua K., Nicholas C. Wegner, Brian S. Cheng, Nann A. Fangue, Matthew J. O'Donnell, Amy M. Regish, John D. Swenson, Estefany Argueta, Stephen D. McCormick, Benjamin H. Letcher, and Lisa M. Komoroske
2024
Journal of Experimental Biology 227(4):jeb246477
https://doi.org/10.1242/jeb.246477
Smaller body size under warming is not due to gill-oxygen limitation in a cold-water salmonid Lonthair, Joshua K., Nicholas C. Wegner, Brian S. Cheng, Nann A. Fangue, Matthew J. O'Donnell, Amy M. Regish, John D. Swenson, Estefany Argueta, Stephen D. McCormick, Benjamin H. Letcher, and Lisa M. Komoroske Journal of Experimental Biology 227(4):jeb246477
2024Lonthair
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The gill oxygen limitation hypothesis remains unsupported by experimental evidence: Response to 'Testing mechanistic theories must be based on correct interpretations'

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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-NWFSC-189. 150 p.
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0

Detection of Leptospira kirschneri in a short-beaked common dolphin (Delphinus delphis delphis) stranded off the coast of southern California, USA

Prager, K.C., Kerri Danil, Elyse Wurster, Kathleen M. Colegrove, Renee Galloway, Niesa Kettler, Rinosh Mani, Ryelan F. McDonough, Jason W. Sahl, Nathan E. Stone, David M. Wagner, and James O. Lloyd-Smith
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BMC Veterinary Research 20:266 (11 p.)
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1

Reintroduction of spring-run Chinook salmon in the San Joaquin River: Evaluating genetic and phenotypic effects of captive breeding

Pregler, Kasey C., Anthony Clemento, Mike Grill, Paul Adelizi, Stephanie M. Carlson, John Carlos Garza
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Conservation Science and Practice 6(9):e13176 (13 p.)
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Catch as catch can: markets, availability, and fishery closures drive distinct responses among the U.S. West Coast coastal pelagic species fleet segments

Quezada, Felipe J., Desiree Tommasi, Timothy H. Frawley, Barbara Muhling, Isaac Kaplan, and Stephen Stohs
2024
Canadian Journal of Fisheries and Aquatic Sciences 81(8):1135-1153
https://doi.org/10.1139/cjfas-2023-0094
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2024Quezada
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1
0
0

Quantifying the fates and retention of larval rockfish through Lagrangian analyses

Quigley, Lucinda A., Peter J.S. Franks, Andrew R. Thompson, John C. Field, and Jarrod A. Santora
2024
Marine Ecology Progress Series 749:109-125
https://doi.org/10.3354/meps14718
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2024Quigley
0
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1
1
0
0
0

Open-source machine learning BANTER acoustic classification of beaked whale echolocation pulses

Rankin, Shannon, Taiki Sakai, Frederick I. Archer, Jay Barlow, Danielle Cholewiak, Annamaria I. DeAngelis, Jennifer L.K. McCullough, Erin M. Oleson, Anne E. Simonis, Melissa S. Soldevilla, and Jennifer S. Trickey
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Ecological Informatics 80:102511 (8 p.)
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0
1

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Raverty, Stephen, Padraig Duignan, Denise Greig, Jessica L. Huggins, Kathy Burek Huntington, Michael Garner, John Calambokidis, Paul Cottrell, Kerri Danil, Dalin D'Alessandro, Deborah Duffield, Moe Flannery, Frances M.D. Gulland, Barbie Halaska, Dyanna M. Lambourn, Taylor Lehnhart, Jorge Urban R., Teri Rowles, James Rice, Kate Savage, Kristin Wilkinson, Justin Greenman, Justin Viezbicke, Brendan Cottrell, P. Dawn Goley, Maggie Martinez, and Deborah Fauquier
2024
PLoS ONE 19(3):e0295861 (25 p.)
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1

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Ray, Kevin D., Gisele Magnusson, Yuhang Liu, Hiroki Wakamatsu, Claire Cazorla, Adam Colilli, Rosemary Kosaka, Daniel K. Lew, Jingmei Li, Wei Liu, Meng Su, and Ziyan Wang
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In: Daniel K. Lew, Gisele Magnusson, and Kevin D. Ray (eds.), Report of Working Group 41 on Marine Ecosystem Services in the North Pacific, p. 75-133. North Pacific Marine Science Organization, PICES Scientific Report no. 65.
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2024Ray
0
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0
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1
0
0
0

Report on the Summer 2023 California Current Ecosystem Survey (CCES) (2307RL), 17 July to 3 November 2023, conducted aboard NOAA Ships Reuben Lasker and Bell M. Shimada, fishing vessels Lisa Marie and Long Beach Carnage, and three uncrewed surface vessels

Renfree, Josiah S., Alice Beittel, Noelle M. Bowlin, Brad E. Erisman, Scott A. Mau, David W. Murfin, Brittany D. Schwartzkopf, Thomas S. Sessions, Kevin L. Stierhoff, Lanora Vasquez, William Watson, Juan P. Zwolinski, and David A. Demer
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U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-702. 53 p.
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1
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0

Relative sarcolipin (SLN) and sarcoplasmic reticulum Ca2+ ATPase (SERCA1) transcript levels in closely related endothermic and ectothermic scombrid fishes: Implications for molecular basis of futile calcium cycle non-shivering thermogenesis (NST)

Robinson, Sean, Nicholas C. Wegner, Chugey A. Sepulveda, and Jens P.C. Franck
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Comparative Biochemistry and Physiology A 295:111667 (7 p.)
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1
0
0

Evaluating top-down, bottom-up, and environmental drivers of pelagic food web dynamics along an estuarine gradient

Rogers, Tanya L., Samuel M. Bashevkin, Christina E. Burdi, Denise D. Colombano, Peter N. Dudley, Brian Mahardja, Lara Mitchell, Sarah Perry, and Parsa Saffarinia
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Ecology 105(4):e4274 (15 p.)
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2024Rogers
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1
0
0
0

Mexico must save the vaquita from gill nets [letter to the editor]

Rojas-Bracho, Lorenzo, Barbara L. Taylor, Randall R. Reeves, Andrew Read, Jay Barlow, Greg Donovan, Peter O. Thomas, Frances Gulland, Sarah L. Mesnick, Robert L. Brownell Jr., Annette Henry, Jorge Urban, and Tim Gerrodette
2024
Science 385(6708):504
https://doi.org/10.1126/science.adp5382
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2024RojasBracho
0
0
0
0
0
0
0
1

Advancing bioenergetics-based modeling to improve climate change projections of marine ecosystems

Rose, Kenneth A., Kirstin Holsman, Janet A. Nye, Emily H. Markowitz, Thomas N.S. Banha, Nina Bednarsek, Juan Bueno-Pardo, David Deslauriers, Elizabeth A. Fulton, Klaus B. Huebert, Martin Huret, Shin-ichi Ito, Stefan Koenigstein, Lingbo Li, Hassan Moustahfid, Barbara A. Muhling, Philipp Neubauer, Jose Ricardo Paula, Elizabeth C. Siddon, Morten D. Skogen, Paul D. Spencer, P. Daniel van Denderen, Gro I. van der Meeren, and Myron A. Peck
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Marine Ecology Progress Series 732:193-221
https://doi.org/10.3354/meps14535
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2024Rose
0
0
0
0
0
1
0
0

Perturbations in a pelagic food web during the NE Pacific large marine heatwave and persistent harmful diatom blooms

Ruiz-Cooley, Rocio I., Clarissa Anderson, Raphael Kudela, Robin Dunkin, and John Field
2024
Harmful Algae 140:102743 (13 p.)
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2024RuizCooley
0
0
0
0
1
0
0
0

Using environmental DNA to assess the response of steelhead/Rainbow Trout and Coastrange Sculpin populations to postfire debris flows in coastal streams of Big Sur, California

Rundio, David E., Brian C. Spence, Dorothy M. Chase, and Carl O. Ostberg
2024
North American Journal of Fisheries Management 44(6):1167-1182
https://doi.org/10.1002/nafm.11032
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2024Rundio
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0
0
0
1
0
0
0

Development of methods for collecting spectral data from Fourier transform near-infrared spectroscopy to age three small coastal pelagic species (Pacific Sardine, Pacific Mackerel, Northern Anchovy) in the northeast Pacific Ocean

Saas, Emma, Emmanis Dorval, Dianna L. Porzio, and Brittany D. Schwartzkopf
2024
U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-694. 47 p.
https://doi.org/10.25923/gp34-z216
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2024Saas
1
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0
0
1
0
0

Project report: Rockfish Recruitment and Ecosystem Assessment Survey (NOAA Ship Reuben Lasker, RL-24-06, May 1 - June 18, 2024)

Sakuma, Keith
2024
NOAA Fisheries, Southwest Fisheries Science Center, Fisheries Ecology Division, Santa Cruz, California. 18 p.
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Project report: Rockfish Recruitment and Ecosystem Assessment Survey (NOAA Ship Reuben Lasker, RL-24-06, May 1 - June 18, 2024) Sakuma, Keith NOAA Fisheries, Southwest Fisheries Science Center, Fisheries Ecology Division, Santa Cruz, California. 18 p.
2024Sakuma
1
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0
1
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0
0

Stay or go? Geographic variation in risks due to climate change for fishing fleets that adapt in-place or adapt on-the-move

Samhouri, Jameal F., Blake E. Feist, Michael Jacox, Owen R. Liu, Kate Richerson, Erin Steiner, John Wallace, Kelly Andrews, Lewis Barnett, Anne H. Beaudreau, Lyall Bellquist, Mer Pozo Buil, Melissa A. Haltuch, Abigail Harley, Chris J. Harvey, Isaac C. Kaplan, Karma Norman, Amanda Phillips, Leif K. Rasmuson, Eric J. Ward, Curt Whitmire, and Rebecca L. Selden
2024
PLOS Climate 3(2):e0000285 (28 p.)
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2024Samhouri
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1
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0
0
0

Beyond boundaries: governance considerations for climate-driven habitat shifts of highly migratory marine species across jurisdictions

Santos, Bianca S., Elliott L. Hazen, Heather Welch, Nerea Lezama-Ochoa, Barbara A. Block, Daniel P. Costa, Scott A. Shaffer, and Larry B. Crowder
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npj Ocean Sustainability 3:22 (8 p.)
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2024Santos
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0
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1
0
0
0
0

Demography of Antarctic krill (Euphausia superba) from the KY1804 austral summer survey in the eastern Indian sector of the Southern Ocean (80 to 150°E), including specific investigations of the upper surface waters

Schaafsma, Fokje L., Ryan Driscoll, Kohei Matsuno, Rikuto Sugioka, Sara Driscoll, Marin van Regteren, Hiroko Sasaki, Ryuichi Matsukura, Jan Andries van Franeker, and Hiroto Murase
2024
Frontiers in Marine Science 11:1411130 (15 p.)
https://doi.org/10.3389/fmars.2024.1411130
Demography of Antarctic krill (Euphausia superba) from the KY1804 austral summer survey in the eastern Indian sector of the Southern Ocean (80 to 150°E), including specific investigations of the upper surface waters Schaafsma, Fokje L., Ryan Driscoll, Kohei Matsuno, Rikuto Sugioka, Sara Driscoll, Marin van Regteren, Hiroko Sasaki, Ryuichi Matsukura, Jan Andries van Franeker, and Hiroto Murase Frontiers in Marine Science 11:1411130 (15 p.)
2024Schaafsma2
0
1
0
0
0
0
0
0

Zooplankton communities at the sea surface of the eastern Indian sector of the Southern Ocean during the austral summer of 2018/2019

Schaafsma, Fokje, Kohei Matsuno, Ryan Driscoll, Hiroko Sasaki, Marin van Regteren, Sara Driscoll, Ryuichi Matsukura, Rikuto Sugioka, Ippei Urabe, Hiroto Murase, and Jan Andries van Franeker
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Progress in Oceanography 226:103303 (14 p.)
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2024Schaafsma
0
1
0
0
0
0
0
0

Seabirds in 3D: A framework to evaluate collision vulnerability with future offshore wind developments. Interim project report #1: Estimating collision vulnerability of the seabird community across a segment of the California Current System.

Schneider, Stephanie R., Eli Wallach, Charles Chamberlin, Sophie B. Bernstein, Sadie Trush, David G. Ainley, Scott B. Terrill, Sharon H. Kramer, R. Glenn Ford, Janet Casey, Jarrod A. Santora, Lisa Ballance, and Arne Jacobson
2024
Report to the California Energy Commission, prepared by H.T. Harvey and Associates, the Schatz Energy Research Center, R.G. Ford Consulting Company, NOAA Southwest Fisheries Science Center, and Oregon State University. Schatz Energy Research Center, Arcata, California. 175 p.
Seabirds in 3D: A framework to evaluate collision vulnerability with future offshore wind developments. Interim project report #1: Estimating collision vulnerability of the seabird community across a segment of the California Current System. Schneider, Stephanie R., Eli Wallach, Charles Chamberlin, Sophie B. Bernstein, Sadie Trush, David G. Ainley, Scott B. Terrill, Sharon H. Kramer, R. Glenn Ford, Janet Casey, Jarrod A. Santora, Lisa Ballance, and Arne Jacobson Report to the California Energy Commission, prepared by H.T. Harvey and Associates, the Schatz Energy Research Center, R.G. Ford Consulting Company, NOAA Southwest Fisheries Science Center, and Oregon State University. Schatz Energy Research Center, Arcata, California. 175 p.
2024Schneider
0
0
0
0
1
0
0
0

Buoyancy gliders opening new research opportunities in the Southern Ocean

Schofield, Oscar, John Kerfoot, Nicole Waite, Schuyler Nardelli, Darren C. McKee, J. Alexander Brearley, and Christian Reiss
2024
Marine Technology Society Journal 58(1-2):26-37
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2024Schofield
0
0
0
1
0
0
0
0

An expert-based system to predict population survival rate from health data

Schwacke, Lori H., Len Thomas, Randall S. Wells, Teresa K. Rowles, Gregory D. Bossart, Forrest Townsend Jr., Marilyn Mazzoil, Jason B. Allen, Brian C. Balmer, Aaron A. Barleycorn, Ashley Barratclough, Louise Burt, Sylvain De Guise, Deborah Fauquier, Forrest M. Gomez, Nicholas M. Kellar, John H. Schwacke, Todd R. Speakman, Eric D. Stolen, Brian M. Quigley, Eric S. Zolman, and Cynthia R. Smith
2024
Conservation Biology 38(1):e14073 (13 p.)
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2024Schwacke
0
0
0
0
0
0
0
1

Update on the status of gray whales since the 2020 Implementation Review

Scordino, Jonathan J., John W. Bickham, John R. Brandon, Robert L. Brownell Jr., Alexander Burdin, Thomas Doniol-Valcroze, Tomoharu Eguchi, Geof H. Givens, Aimee R. Lang, Dennis I. Litovka, Gen Nakamura, Andre E. Punt, Joshua D. Stewart, Jorge Urban R., and David W. Weller
2024
Journal of Cetacean Research and Management 25:1-18
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2024Scordino
0
0
0
0
0
0
0
1

Comparison of environmental DNA and underwater visual count surveys for detecting juvenile Coho Salmon in small rivers

Shaffer, Jason T., Andrew P. Kinziger, Eric P. Bjorkstedt, and Andre Buchheister
2024
North American Journal of Fisheries Management 44(2):449-462
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2024Shaffer
0
0
0
0
1
0
0
0

Spirochaete genome identified in red abalone sample represents a novel genus Candidatus Haliotispira gen. nov. within the order Spirochaetales

Sharma, Sharu Paul, Catherine M. Purcell, John R. Hyde, and Andrew J. Severin
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International Journal of Systematic and Evolutionary Microbiology 74:006198 (8 p.)
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2024Sharma
0
0
0
0
0
1
0
0

Identifying spatial movements and residency of pelagic thresher sharks (Alopias pelagicus) using satellite and passive acoustic telemetry to inform local conservation in central Indonesia

Shidqi, Rafid A., Mark V. Erdmann, Edy Setyawan, Nerea Lezama-Ochoa, Dewi R. Sari, Abraham B. Sianipar, Joshua D. Stewart, and Donald A. Croll
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Frontiers in Fish Science 2:1391062 (16 p.)
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2024Shidqi
0
0
0
1
0
0
0
0

Organismal responses to deteriorating water quality during the historic 2020 red tide off Southern California

Skelton, Zachary R., Lillian R. McCormick, Garfield T. Kwan, Joshua Lonthair, Carlos Neira, Samantha M. Clements, Todd R. Martz, Philip J. Bresnahan, Uwe Send, Sarah N. Giddings, Jeffrey C. Sevadjian, Stephanie Jaeger, Adriano Feit, Benjamin W. Frable, Phillip J. Zerofski, Melissa Torres, Jeffrey A. Crooks, Justin McCullough, Melissa L. Carter, Eva Ternon, Luke P. Miller, Gabriella M. Kalbach, Duncan C. Wheeler, P. Ed Parnell, Katherine M. Swiney, Garrett Seibert, Jeremiah J. Minich, John R. Hyde, Philip A. Hastings, Jennifer E. Smith, Lisa M. Komoroske, Martin Tresguerres, Lisa A. Levin, and Nicholas C. Wegner
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Elementa: Science of the Anthropocene 12(1):00067 (27 p.)
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2024Skelton
0
0
0
0
0
1
0
0

Observations of skin color aberrations in four shark species off the coast of southern California, USA

Skelton, Zachary R., Tanya S. Prinzing, Andrew P. Nosal, Zoey Vagner, Peter Demman, Phil J. Zerofski, and Nicholas C. Wegner
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Environmental Biology of Fishes 107(3):391-400
https://doi.org/10.1007/s10641-024-01532-3
Observations of skin color aberrations in four shark species off the coast of southern California, USA Skelton, Zachary R., Tanya S. Prinzing, Andrew P. Nosal, Zoey Vagner, Peter Demman, Phil J. Zerofski, and Nicholas C. Wegner Environmental Biology of Fishes 107(3):391-400
2024Skelton2
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Marine biophysical conditions influence the vertical and horizontal distribution of sub-adult Chinook salmon in nearshore marine waters

Smith, Joseph M., Brian J. Burke, Doug Jackson, Brian Wells, Brian Beckman, Will Duguid, Thomas P. Quinn, and David D. Huff
2024
Marine Ecology Progress Series 744:133-146
https://doi.org/10.3354/meps14672
Marine biophysical conditions influence the vertical and horizontal distribution of sub-adult Chinook salmon in nearshore marine waters Smith, Joseph M., Brian J. Burke, Doug Jackson, Brian Wells, Brian Beckman, Will Duguid, Thomas P. Quinn, and David D. Huff Marine Ecology Progress Series 744:133-146
2024Smith
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Influence of migration range and foraging ecology on mercury accumulation in Southern Ocean penguins

Sontag, Philip T., Linda V. Godfrey, William R. Fraser, Jefferson T. Hinke, and John R. Reinfelder
2024
Science of the Total Environment 951:175154 (9 p.)
https://doi.org/10.1016/j.scitotenv.2024.175154
Influence of migration range and foraging ecology on mercury accumulation in Southern Ocean penguins Sontag, Philip T., Linda V. Godfrey, William R. Fraser, Jefferson T. Hinke, and John R. Reinfelder Science of the Total Environment 951:175154 (9 p.)
2024Sontag
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Insights into vertebral band pair deposition rate in the juvenile common thresher shark (Alopias vulpinus) in the northeastern Pacific Ocean

Spear, Luka N., Suzanne Kohin, John A. Mohan, and R.J. David Wells
2024
Journal of Fish Biology 104(1):104-112
https://doi.org/10.1111/jfb.15538
Insights into vertebral band pair deposition rate in the juvenile common thresher shark (Alopias vulpinus) in the northeastern Pacific Ocean Spear, Luka N., Suzanne Kohin, John A. Mohan, and R.J. David Wells Journal of Fish Biology 104(1):104-112
2024Spear
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