NOAA FISHERIES

NVODS and the development of OPeNDAP Cornillon, Peter, Jennifer Adams, M. Benno Blumenthal, Eric Chassignet, Ethan Davis, Steve Hankin, James Kinter, Roy Mendelssohn, James T. Potemra, Ashwanth Srinivasan, and Joseph Sirott Oceanography 22(2):116-127

Nutrient and salinity decadal variations in the central and eastern North Pacific Di Lorenzo, E., J. Fiechter, N. Schneider, A. Bracco, A.J. Miller, P.J.S. Franks, S.J. Bograd, A.M. Moore, A.C. Thomas, W. Crawford, A. Pena, and A.J. Hermann Geophysical Research Letters 36:L14601 (6 p.)

Meeting report: "Workshop on Climate Change and Adaptation Options for Cetaceans and Other Marine Biodiversity of the Eastern Pacific," Santo Domingo de Heredia, Costa Rica, 9-11 February 2009 Fonseca, Ana, Daniel Palacios, Jennifer Hoffman, and Mark Simmonds The Society for Marine Mammalogy Newsletter 17(2):6-7

Global production and economics Herrick, Samuel F., Jr., Jerrold G. Norton, Rognvaldur Hannesson, U. Rashid Sumaila, Mahfuzuddin Ahmed, and Julio Pena-Torres In: D. Checkley et al. (eds.), Climate change and small pelagic fish, p. 256-274. Cambridge University Press.

Climate variability and the collapse of a Chinook salmon stock [abstract] Lindley, S., M. Mohr, W.T. Peterson, C. Grimes, J. Stein, J. Anderson, L.W. Botsford, D. Bottom, C. Busack, T. Collier, J. Ferguson, C. Garza, A. Grover, D. Hankin, R. Kope, P. Lawson, A. Low, B. MacFarlane, K. Moore, M. Palmer-Zwahlen, F.B. Schwing, J. Smith, C. Tracy, R.S. Webb, B. Wells, and T. Williams American Geophysical Union, 2009 Fall Meeting, Abstract NH41A-1230

What caused the Sacramento River fall Chinook stock collapse? Lindley, S.T., C.B. Grimes, M.S. Mohr, W. Peterson, J. Stein, J.T. Anderson, L.W. Botsford, D.L. Bottom, C.A. Busack, T.K. Collier, J. Ferguson, J.C. Garza, A.M. Grover, D.G. Hankin, R.G. Kope, P.W. Lawson, A. Low, R.B. MacFarlane, K. Moore, M. Palmer-Zwahlen, F.B. Schwing, J. Smith, C. Tracy, R. Webb, B.K. Wells, and T.H. Williams U.S. Department of Commerce, NOAA Technical Memorandum NMFS-SWFSC-447. 121 p.

The state of the California Current, Spring 2008-2009: cold conditions drive regional differences in coastal production McClatchie, Sam, Ralf Goericke, Franklin B. Schwing, Steven J. Bograd, William T. Peterson, Robert Emmett, Richard Charter, William Watson, Nancy Lo, Kevin Hill, Curtis Collins, Mati Kahru, B. Greg Mitchell, J. Anthony Koslow, Jose Gomez-Valdes, Bertha E. Lavaniegos, Gilberto Gaxiola-Castro, Jon Gottschalck, Michelle L'Heureux, Yan Xue, Marlenne Manzano-Sarabia, Eric Bjorkstedt, Stephen Ralston, John Field, Laura Rogers-Bennet, Lisa Munger, Greg Campbell, Karlina Merkens, Dominique Camacho, Andrea Havron, Annie Douglas, and John Hildebrand CalCOFI Reports 50:43-68

Serving ocean model data on the cloud Meisinger, Michael, Claudiu Farcas, Emilia Farcas, Charles Alexander, Matthew Arrott, Jeff de La Beaujardiere, Paul Hubbard, Roy Mendelssohn, and Richard Signell In: Marine technology for our future: global and local challenges. OCEANS 2009, MTS/IEEE Biloxi (26-29 October 2009, Biloxi, Mississippi). IEEE / Marine Technology Society.

Comment on 'A spatio-temporal model for mean, anomaly, and trend fields of North Atlantic sea surface temperature' by Lemos and Sanso Mendelssohn, Roy Journal of the American Statistical Association 104(485):20-22

Potential new production estimates in four eastern boundary upwelling ecosystems Messie, Monique, Jesus Ledesma, Dorota D. Kolber, Reiko P. Michisaki, David G. Foley, and Francisco P. Chavez Progress in Oceanography 83(1-4):151-158

Fisheries abundance cycles in ecosystem and economic management of California fish and invertebrate resources Norton, Jerrold G., Samuel F. Herrick, and Janet E. Mason In: Richard J. Beamish and Brian J. Rothschild (eds.), The future of fisheries science in North America, p. 227-244. Springer.

Incorporation of climate effects on marine ecosystems Osgood, Kenric, and Franklin Schwing Earth System Monitor 17(4):6

The influence of oceanographic processes on top predator (sea turtle, seabird, marine mammal) distribution Palacios, Daniel, H. Bailey, and S.J. Bograd In: Jennifer Hoffman, Ana Fonseca, and Carlos Drews (eds.), Cetaceans and other marine biodiversity of the Eastern Tropical Pacific: Options for adapting to climate change (workshop report, February 9-11, San Jose, Costa Rica), p. 29-30. WWF / Ministerio de Ambiente, Energia y Telecomunicaciones de Costa Rica (MINAET).

Odontocete sightings collected during offshore cruises in the western and southwestern Caribbean Sea Pardo, Mario A., Angelica Mejia-Fajardo, Sandra Beltran-Pedreros, Fernando Trujillo, Iain Kerr, and Daniel M. Palacios Latin American Journal of Aquatic Mammals 7(1-2):57-62

The false killer whale (Pseudorca crassidens) in the southwestern Caribbean: first stranding record in Colombian waters Pardo, Mario A., Cristina Jimenez-Pinedo, and Daniel M. Palacios Latin American Journal of Aquatic Mammals 7(1-2):63-67

Trapping migrating zooplankton Pierson, James J., Bruce W. Frost, David Thoreson, Andrew W. Leising, James R. Postel, and Mikelle Nuwer Limnology and Oceanography: Methods 7(5):334-346

Phylogeography of California and Galápagos sea lions and population structure within the California sea lion Schramm, Yolanda, S.L. Mesnick, J. de la Rosa, D.M. Palacios, M.S. Lowry, D. Aurioles-Gamboa, H.M. Snell, and S. Escorza-Treviño Marine Biology 156(7):1375-1387

Winter pre-conditioning of seabird phenology in the California Current Schroeder, Isaac D., William J. Sydeman, Nandita Sarkar, Sarah Ann Thompson, Steven J. Bograd, and Franklin B. Schwing Marine Ecology Progress Series 393:211-223

A teachable moment Schwing, Frank In: Richard Hayes (ed.), Thoreau's legacy: American stories about global warming, p. 144-145. Union of Concerned Scientists / Penguin Classics.

Developing statistically robust IPCC climate model products for estuarine-dependent and anadromous fish stock assessments Schwing, Frank, Eric Danner, Steve Lindley, Roy Mendelssohn, Jim Overland, Steve Ralston, Bruno Sanso, and Muyin Wang Report to NOAA Fisheries and the Environment (FATE) program, Project 08-06. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 5 p.

Appendix A: North Pacific Ocean conditions and projections for climate change Schwing, Franklin In: Linda Mazur and Carmen Milanes (eds.), Indicators of climate change in California, p. A1-A8. California Environmental Protection Agency, Office of Environmental Health Hazard Assessment.

Coastal ocean temperatures Schwing, Franklin B. In: Linda Mazur and Carmen Milanes (eds.), Indicators of climate change in California, p. 109-113. California Environmental Protection Agency, Office of Environmental Health Hazard Assessment.

Future research requirements for understanding the effects of climate variability on fisheries for their management Schwing, Franklin B., William T. Peterson, Ned Cyr, and Kenric E. Osgood In: Richard J. Beamish and Brian J. Rothschild (eds.), The future of fisheries science in North America, p. 621-636. Springer.

Spatiotemporal habitat use by breeding sooty shearwaters Puffinus griseus Shaffer, Scott A., Henri Weimerskirch, Darren Scott, David Pinaud, David R. Thompson, Paul M. Sagar, Henrik Moller, Graeme A. Taylor, David G. Foley, Yann Tremblay, and Daniel P. Costa Marine Ecology Progress Series 391:209-220

Movements of olive ridley sea turtles Lepidochelys olivacea and associated oceanographic features as determined by improved light-based geolocation Swimmer, Yonat, Lianne McNaughton, David Foley, Lucas Moxey, and Anders Nielsen Endangered Species Research 10:245-254

Marine ecosystems, climate and phenology: introduction Sydeman, William J., and Steven J. Bograd Marine Ecology Progress Series 393:185-188

Integrating indicators: Co-variation, periodicity and amplitude of key biological signals from central Oregon and northern California Sydeman, William, Alec MacCall, Kyra Mills, Frank Schwing, Steven Bograd, Chet Grosch, and Julie Thayer Report to NOAA Fisheries and the Environment (FATE) program, Project 08-07. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 1 p.

A central California coastal ocean modeling study: 1. Forward model and the influence of realistic versus climatological forcing Veneziani, M., C.A. Edwards, J.D. Doyle, and D. Foley Journal of Geophysical Research: Oceans 114(C4):C04015 (16 p.)

Remote sensing applications to marine resource management Wilson, Cara, Changsheng Chen, Christopher Clark, Paul Fanning, Marie-Helene Forget, Kevin Friedland, Evan Howell, Chuanmin Hu, Kimberly Hyde, Donald Kobayashi, Alan Longhurst, Bruce Monger, Jesus Morales, Daniel Pendleton, Andrew Pershing, Trevor Platt, Jeffrey Polovina, Nicholas Record, Shubha Sathyendranath, Kenneth Sherman, and Linda Woodard In: Marie-Helene Forget, Venetia Stuart, and Trevor Platt (eds.), Remote sensing in fisheries and aquaculture, p. 43-56. International Ocean-Colour Coordinating Group, IOCCG Report no. 8.

Identifying and comparing phases of movement by leatherback turtles using state-space models Bailey, H., G. Shillinger, D. Palacios, S. Bograd, J. Spotila, F. Paladino, and B. Block Journal of Experimental Marine Biology and Ecology 356:128-135

Oxygen declines and the shoaling of the hypoxic boundary in the California Current Bograd, Steven J., Carmen G. Castro, Emanuele Di Lorenzo, Daniel M. Palacios, Helen Bailey, William Gilly, and Francisco P. Chavez Geophysical Research letters 35:L12607 (6 p.)

The phenology of coastal upwelling in the California Current Bograd, Steven, Daniel Palacios, William Sydeman, Scott Benson, Mark Carr, and Mark Readdie Report to NOAA Fisheries and the Environment (FATE) program, Project 07-07. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 4 p.

Forecasting northeastern Pacific ecosystem responses to La Nina Bond, Nicholas A., Harold P. Batchelder, and Steven J. Bograd Eos, Transactions of the American Geophysical Union 89(35):321-322

North Pacific Gyre Oscillation links ocean climate and ecosystem change Di Lorenzo, E., N. Schneider, K.M. Cobb, P.J.S. Franks, K. Chhak, A.J. Miller, J.C. McWilliams, S.J. Bograd, H. Arango, E. Curchitser, T.M. Powell, and P. Riviere Geophysical Research Letters 35:L08607 (6 p.)

Ocean colour and climate change Hoepffner, Nick, Cara Wilson, and Samantha Lavender T. Platt, et al. (eds.), Why ocean colour? The societal benefits of ocean-colour technology, p. 103-109. International Ocean Colour Coordinating Group (IOCCG), Report no. 7, Dartmouth, Canada.

Biogeochemical cycles Hoepffner, Nicolas, Frédéric Mélin, Mark Dowell, John Marra, Toshiro Saino, and Cara Wilson T. Platt, et al. (eds.), Why ocean colour? The societal benefits of ocean-colour technology, p. 31-46. International Ocean Colour Coordinating Group (IOCCG), Report no. 7, Dartmouth, Canada.

Patterns and controls of chlorophyll-a and primary productivity cycles in the Southern California Bight Mantyla, Arnold W., Steven J. Bograd, and Elizabeth L. Venrick Journal of Marine Systems 73(1-2):48-60

The state of the California Current, 2007-2008: La Niña conditions and their effects on the ecosystem McClatchie, Sam, Ralf Goericke, J. Anthony Koslow, Franklin B. Schwing, Steven J. Bograd, Richard Charter, William Watson, Nancy Lo, Kevin Hill, Jon Gottschalck, Michelle l'Heureux, Yan Xue, William T. Peterson, Robert Emmett, Curtis Collins, Gilberto Gaxiola-Castro, Reginaldo Durazo, Mati Kahru, B. Greg Mitchell, K. David Hyrenbach, W.J. Sydeman, R.W. Bradley, P. Warzybok, and Eric Bjorkstedt CalCOFI Reports 49:39-76

Distribution and relative abundance of oceanic cetaceans in Colombia's Pacific EEZ from survey cruises and platforms of opportunity Palacios, Daniel M., Tim Gerrodette, Carolina Garcia, Isabel C. Avila, German A. Soler, Sandra Bessudo, and Fernando Trujillo Paper SC/60/SM4 presented to the International Whaling Commission, Scientific Committee (SC60 meeting, Santiago, Chile, 2008)

Remotely sensed spawning habitat of Pacific sardine (Sardinops sagax) and Northern anchovy (Engraulis mordax) within the California Current. Reiss, Christian S., David M. Checkley Jr, and Steven J. Bograd. Fisheries Oceanography 17(2):126-136.

Persistent leatherback turtle migrations present opportunities for conservation Shillinger, George L., Daniel M. Palacios, Helen Bailey, Steven J. Bograd, Alan M. Swithenbank, Philippe Gaspar, Bryan P. Wallace, James R. Spotila, Frank V. Paladino, Rotney Piedra, Scott A. Eckert, and Barbara A. Block PLoS Biology 6(7):e171 (p. 1408-1416)

Variation in the probability that male coho salmon will mature early: inferences from hierarchical models. Watters, G.M. and C. Bessey. Transactions of the American Fisheries Society 137:70-95. ANADROMOUS FISHES - SALMON - COHO - MALES - GROWTH - MATURATION - MODELS - INFERENCES - VARIATION - PROBABILITY -

Migration of an upper trophic level predator, the salmon shark Lamna ditropis, between distant ecoregions Weng, Kevin C., David G. Foley, James E. Ganong, Christopher Perle, George L. Shillinger, and Barbara A. Block Marine Ecology Progress Series 372:253-264

Ocean-colour radiometry and fisheries Wilson, Cara, Jesus Morales, Shailesh Nayak, Ichio Asanuma, and Gene Feldman T. Platt, et al. (eds.), Why ocean colour? The societal benefits of ocean-colour technology, p. 47-58. International Ocean Colour Coordinating Group (IOCCG), Report no. 7, Dartmouth, Canada.

Biological and physical forcings of late summer chlorophyll blooms at 30°N in the oligotrophic Pacific Wilson, Cara, Tracy A. Villareal, Nikolai Maximenko, Steven J. Bograd, Joseph P. Montoya, and Caimee A. Schoenbaechler Journal of Marine Systems 69(3-4):164-176

Bottom-up and top-down indicators of ecosystem variability: an integrated ecosystem assessment for the California Current system Bograd, Steven, Frank Schwing, William Sydeman, Julie Thayer, John Field, Brian Wells, Roger Hewitt, and Kevin Hill Report to NOAA Fisheries and the Environment (FATE) program, Project 06-16. NOAA National Marine Fisheries Service, Silver Spring, Maryland. 2 p.

Past and present distribution, densities and movements of blue whales Balaenoptera musculus in the Southern Hemisphere and northern Indian Ocean Branch, T.A., K.M. Stafford, D.M. Palacios, C. Allison, J.L. Bannister, C.L.K. Burton, E. Cabrera, C.A. Carlson, B. Galletti Vernazzani, P.C. Gill, R. Hucke-Gaete, K.C.S. Jenner, M.-N. M. Jenner, K. Matsuoka, Y.A. Mikhalev, T. Miyashita, M.G. Morrice, S. Nishiwaki, V.J. Sturrock, D. Tormosov, R.C. Anderson, A.N. Baker, P.B. Best, P. Borsa, R.L. Brownell Jr., S. Childerhouse, K.P. Findlay, T. Gerrodette, A.D. Ilangakoon, M. Joergensen, B. Kahn, D.K. Ljungblad, B. Maughan, R.D. McCauley, S. McKay, T.F. Norris, Oman Whale and Dolphin Research Group, S. Rankin, F. Samaran, D. Thiele, K. Van Waerebeek, and R.M. Warneke Mammal Review 37(2):116-175

NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Field, John (ed.), Anne Allen, John Hyde, Janet Mason, Deanna Pinkard, Stephen Ralston, Susan Sogard, Cynthia Thomson, and William Watson In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Forty-eighth annual meeting of the TSC (April 24-25, 2007, Southwest Fisheries Science Center, Santa Cruz, California), p. 183-203. Pacific States Marine Fisheries Commission, Portland, Oregon.

The state of the California Current, 2006-2007: Regional and local processes dominate Goericke, Ralf, Elizabeth Venrick, Tony Koslow, William J. Sydeman, Franklin B. Schwing, Steven J. Bograd, William T. Peterson, Robert Emmett, J. Ruben Lara Lara, Gilberto Gaxiola Castro, Jose Gomez Valdez, K. David Hyrenbach, Russel W. Bradley, Michael J. Weise, James T. Harvey, Curtis Collins, and Nancy C.H. Lo CalCOFI Reports 48:33-66

The Transition Zone Chlorophyll Front can trigger Acanthaster planci outbreaks in the Pacific Ocean: Historical confirmation. Houk, P., S. Bograd, and R. Van Woesik. Journal of Oceanography 63:149-154 INVERTEBRATES - SEA STARS - CROWN-OF-THORNS STARFISH - OCEANOGRAPHY - TRANSITION ZONE CHLOROPHYLL FRONT - PACIFIC OCEAN - HISTORY

Time series of the northeast Pacific Pena, M. Angelica, and Steven J. Bograd Progress in Oceanography 75(2):115-119

Marine debris collects within the North Pacific Subtropical Convergence Zone Pichel, William G., James H. Churnside, Timothy S. Veenstra, David G. Foley, Karen S. Friedman, Russell E. Brainard, Jeremy B. Nicoll, Quanan Zheng, and Pablo Clemente-Colon Marine Pollution Bulletin 54(8):1207-1211

Southern Hemisphere humpback whales wintering off Central America: insights from water temperature into the longest mammalian migration. Rasmussen, K., D. M. Palacios, J. Calambokidis, M. T. Saborı´o, L. Dalla Rosa, E. R. Secchi, G. H. Steiger, J. M. Allen, and G. S. Stone. Biology Letters 3(3):302-305 MARINE MAMMALS - CETACEANS - WHALES - HUMPBACK WHALE - CENTRAL AMERICA - SOUTHERN HEMISPHERE - WATER TEMPERATURE - MIGRATION

Back-calculating length from skeletal growth marks in loggerhead sea turtles Caretta caretta Snover, M.L., L. Avens, and A.A. Hohn Endangered Species Research 3(1):95-104

Bottom-up forcing and the decline of Steller sea lions (Eumetopias jubatus) in Alaska: assessing the ocean climate hypothesis Trites, Andrew W., Arthur J. Miller, Herbert G.G. Maschner, Michael A. Alexander, Steven J. Bograd, John A. Calder, Antonietta Capotondi, Kenneth O. Coyle, Emanuele Di Lorenzo, Bruce P. Finney, Edward J. Gregr, Chester E. Grosch, Steven R. Hare, George L. Hunt Jr., Jaime Jahncke, Nancy B. Kachel, Hey-Jin Kim, Carol Ladd, Nathan J. Mantua, Caren Marzban, Wieslaw Maslowski, Roy Mendelssohn, Douglas J. Neilson, Stephen R. Okkonen, James E. Overland, Katherine L. Reedy-Maschner, Thomas C. Royer, Franklin B. Schwing, Julian X.L. Wang, and Arliss J. Winship Fisheries Oceanography 16(1): 46-67 MARINE MAMMALS - PINNIPEDS - SEA LIONS - STELLAR SEA LION - ALASKA - BOTTOM-UP FORCING - DECLINE - CLIMATE

Bays and estuaries Allen, Larry G., Mary M. Yoklavich, Gregor M. Cailliet, and Michael H. Horn In: Larry G. Allen, Daniel J. Pondella II, and Michael H. Horn (eds.), The ecology of marine fishes: California and adjacent waters, p. 119-148. University of California Press. OCEANOGRAPHY - BAYS - ESTUARIES - MARINE FISHES - ECOLOGY

NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Field, John (ed.), Anne Allen, and Janet Mason In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Forty seventh annual meeting of the TSC (May 2-3, 2006, Inn at Otter Crest, Otter Rock, Oregon), p. 174-189. Pacific States Marine Fisheries Commission.

Using satellite data products to manage living marine resources. Friedl, L., C. Wilson, Y. Chao, S. Bograd, and W. Turner. Eos, Transactions, American Geophysical Union 87:437-438. LIVING MARINE RESOURCES - MANAGEMENT - SATELLITES - SATELLITE DATA

Oceanographic characteristics of biological hot spots in the North Pacific: A remote sensing perspective. Palacios, D. M., S. J. Bograd, D. G. Foley, and F. B. Schwing. Deep-Sea Research II 53(3-4):250-269. OCEANOGRAPHY - NORTH PACIFIC - CHARACTERISTICS - HABITAT - BIOLOGY - HOT SPOTS - REMOTE SENSING

The state of the California Current, 2005-2006: Warm in the north, cool in the south Peterson, Bill, Robert Emmett, Ralf Goericke, Elizabeth Venrick, Arnold Mantyla, Steven J. Bograd, Franklin B. Schwing, Roger Hewitt, Nancy Lo, William Watson, Jay Barlow, Mark Lowry, Steve Ralston, Karin A. Forney, Bertha E. Lavaniegos, William J. Sydeman, David Hyrenbach, Russel W. Bradley, Pete Warzybok, Francisco Chavez, Karen Hunter, Scott Benson, Michael Weise, James Harvey, Gilberto Gaxiola-Castro, and Reginaldo Durazo CalCOFI Reports 47:30-74 OCEANOGRAPHY - CALIFORNIA CURRENT - TEMPERATURE

Delayed coastal upwelling along the U.S. West Coast in 2005: A historical perspective Schwing, F. B., N. A. Bond, S. J. Bograd, T. Mitchell, M. A. Alexander, and N. Mantua Geophysical Research Letters 33:L22S01 OCEANOGRAPHY - COASTAL UPWELLING - CALIFORNIA - COASTAL CURRENT ECOSYSTEM - CCE

Delayed coastal upwelling along the U.S. West Coast in 2005: A historical perspective Schwing, Franklin B., Nicholas A. Bond, Steven J. Bograd, Todd Mitchell, Michael A. Alexander, and Nathan Mantua Geophysical Research Letters 33:L22S01 (5 p.)

Top-down and bottom-up control of life-history strategies in coho salmon (Oncorhynchus kisutch) Snover, M.L., G.M. Watters, and M. Mangel American Naturalist 167(5):E140-E157

Integrating enhanced satellite data maps into coastal management. Stegmann, P. M., D. G. Foley, C. King, F. B. Schwing, H. Price, S. J. Bograd, and D. M. Palacios. Eos, Transactions, American Geophysical Union 87(14):137, 142. COASTAL MANAGEMENT - SATELLITES - SATELLITE DATA MAPS - ENHANCED

Spring-time distributions of migratory marine birds in the southern California Current: Oceanic eddy associations and coastal habitat hotspots over 17 years. Yen, P. P. W., W. J. Sydeman, S. J. Bograd, and K. D. Hyrenbach. Deep-Sea Research II 53(3-4):399-418. BIRDS - SEABIRDS - MARINE BIRDS - MIGRATORY - SOUTHERN CALIFORNIA CURRENT - OCEANIC EDDIES - COASTAL HABITAT - SPRING DISTRIBUTION - HOT SPOTS - HISTORICAL DATA

NMFS Southwest Fisheries Science Center: Agency report to the Technical Subcommittee of the Canada-U.S. Groundfish Committee Allen, Anne, Alec MacCall, Janet Mason, Frank Schwing, and John Field In: Report of the Technical Subcommittee of the Canada-United States Groundfish Committee: Forty-fifth annual meeting of the TSC (May 3-4, 2005, Parksville, British Columbia), p. 177-194. Pacific States Marine Fisheries Commission.

On the subduction of upwelled waters in the California Current. Bograd, S. J., and A. W. Mantyla. Journal of Marine Research 63(5):863-885. OCEANOGRAPHY - CALIFORNIA CURRENT - UPWELLING - SUBDUCTION

Spatial heterogeneity of sea surface temperature trends in the Gulf of Alaska. Bograd, S. J., R. Mendelssohn, F. B. Schwing, and A. J. Miller. Atmosphere-Ocean 43(3):241-247. OCEANOGRAPHY - GULF OF ALASKA - SEA SURFACE TEMPERATURE - HETEROGENEITY

The state of the California Current, 2004-2005: Still cool? Goericke, R., E. Venrick, A. Mantyla, S. J. Bograd, F. B. Schwing, A. Huyer, R. L. Smith, P. A. Wheeler, R. Hooff, W. T. Peterson, C. A. Collins, N. Lo, G. Gaxiola-Castro, R. Durazo, K. D. Hyrenbach, and W. J. Sydeman. CalCOFI Reports 46: 32-71. OCEANOGRAPHY - CALIFORNIA CURRENT - STATE - COOL

Abrupt changes in an 8000-year precipitation reconstruction for Nevada, the western USA. Gu, X., J. M. Jiang, F. Schwing, and R. Mendelssohn. Journal of Geographical Sciences 15:259-272. CLIMATOLOGY - CLIMATE - PRECIPITATION - RECONSTRUCTION - CHANGE - NEVADA - WESTERN UNITED STATES

Reproduction of Pseudocalanus newmani (Copepoda: Calanoida) is deleteriously affected by diatom blooms – A field study. Halsband-Lenk, C., J. J. Pierson, and A. W. Leising. Progress in Oceanography 67:332-348. INVERTEBRATES - COPEPODS - MARINE PLANKTON - REPRODUCTION - DIATOMS - DIATOM BLOOMS

Persistent habitat use by Chinook salmon Oncorhynchus tshawytscha in the coastal ocean. Hinke, J. T., D. G. Foley, C. Wilson, and G. M. Watters. Marine Ecology Progress Series 304:207-220 ANADROMOUS FISHES - SALMON - CHINOOK - HABITAT USE - COASTAL OCEAN WATERS

Ocean habitat use in autumn by chinook salmon in coastal waters of Oregon and California. Hinke, J. T., G. M. Watters, G. W. Boehlert, and P. Zedonis. Marine Ecology Progress Series 285:181-192. ANADROMOUS FISHES - SALMON - CHINOOK - CALIFORNIA - OREGON - COASTAL OCEAN WATERS - HABITAT USE

Biomass and environmental effects on surplus production in California sardine (Sardinops sagax). Jacobson, L. D., S. J. Bograd, R. H. Parrish, R. Mendelssohn, and F. B. Schwing. Canadian Journal of Fisheries and Aquatic Sciences 62:1782-1796. MARINE FISHES - SARDINES - CALIFORNIA SARDINE - PRODUCTION - BIOMASS - ENVIRONMENTAL EFFECTS

Copepod grazing during spring blooms: does Calanus pacificus avoid harmful diatoms? Leising, A. W., J. P. Pierson, C. Halsband-Lenk, R. Horner, and J. Postel. Progress in Oceanography 67:384-405. INVERTEBRATES - COPEPODS - FORAGING - SPRING BLOOMS - MARINE PLANKTON - DIATOMS

Copepod grazing during spring blooms: can Pseudocalanus newmani induce trophic cascades? Leising, A. W., J. P. Pierson, C. Halsband-Lenk, R. Horner, and J. Postel. Progress in Oceanography 67:406-421. INVERTEBRATES - COPEPODS - FORAGING - SPRING BLOOMS - TROPHIC CASCADES - MARINE PLANKTON - DIATOMS

Copepod foraging and predation risk within the surface layer during nighttime feeding forays. Leising, A. W., J. P. Pierson, S. Cary, and B. Frost. Journal of Plankton Research 27:981-1001. INVERTEBRATES - COPEPODS - FORAGING - PREDATION RISK - SURFACE LAYER - NIGHTTIME - MARINE PLANKTON -

The balance between microzooplankton grazing and phytoplankton growth in a highly productive fjord. Leising, A. W., R. Horner, J. P. Pierson, C. Halsband-Lenk, and J. Postel. Progress in Oceanography 67:366-383. INVERTEBRATES - COPEPODS - FORAGING - GRAZING - PHYTOPLANKTON - GROWTH - MARINE MICROZOOPLANKTON - DIATOMS - PRODUCTION - FJORD

Teaching old indices new tricks: a state-space analysis of El Niño related climate indices. Mendelssohn, R., S. J. Bograd, F. B. Schwing, and D. M. Palacios. Geophysical Research Letters 32: L07709 CLIMATOLOGY - CLIMATE - INDICES - STATE-SPACE ANALYSIS - OCEANOGRAPHY - EL NINO

Interdecadal changes in mesoscale eddy variance in the Gulf of Alaska circulation: Implications for the Steller sea lion decline. Miller, A. J., E. Di Lorenzo, D. J. Neilson, H. J. Kim. A. Capotondi, M. Alexander, S. J. Bograd, F. B. Schwing, R. Mendelssohn, K. Hedstrom, and D. L. Musgrave. Atmosphere-Ocean 43(3):231-240. MARINE MAMMALS - PINNIPEDS - SEA LIONS - STELLAR SEA LION - CLIMATOLOGY - CLIMATE - INTERDECADAL CHANGES - MESOSCALE EDDY VARIANCE - GULF OF ALASKA - CIRCULATION

A unified treatment of top-down and bottom-up control of reproduction in populations. Munch, S. B., M. L. Snover, G. M. Watters, and M. Mangel. Ecology Letters 8:691-695. ECOSYSTEMS - RECRUITMENT - BEHAVIOR - BOTTOM-UP - COMPETITION - REPRODUCTION - TOP-DOWN - POPULATIONS - COMMUNITIES - MARINE FISHES

Relationship of California sardine (Sardinops sagax) abundance to ecological changes in the California Current System. Norton, J. G., and J. E. Mason. CalCOFI Reports 46:83-92. MARINE FISHES - SARDINES - CALIFORNIA SARDINE - ABUNDANCE - ECOLOGICAL CHANGE - OCEANOGRAPHY - CALIFORNIA CURRENT

A census of Tehuantepec and Papagayo eddies in the northeastern tropical Pacific. Palacios, D. M., and S. J. Bograd. Geophysical Research Letters 32, L23606 OCEANOGRAPHY - EDDIES - TEHUANTEPEC - PAPAGAYO - NORTHEASTERN TROPICAL PACIFIC

Vertical distribution and abundance of Calanus pacificus and Pseudocalanus newmani in relation to chlorophyll a concentrations in Dabob Bay, Washington. Pierson, J. J., A. W. Leising, C. Halsband-Lenk, and N. Firm. Progress in Oceanography 67:349-365. INVERTEBRATES - COPEPODS - VERTICAL DISTRIBUTION - ABUNDANCE - CHLOROPHYLL - WASHINGTON

Reproductive success of Calanus pacificus during diatom blooms in Dabob Bay, Washington. Pierson, J. J., C. Halsband-Lenk, and A. W. Leising. Progress in Oceanography 67:314-331. INVERTEBRATES - COPEPODS - REPRODUCTIVE SUCCESS - REPRODUCTION - DIATOMS - DIATOM BLOOMS - WASHINGTON

El Niño Impacts of the California Current Ecosystem. Schwing, F. B, D. M. Palacios, and S. J. Bograd. U.S. CLIVAR Variations 3(2):5-8. OCEANOGRAPHY - CALIFORNIA CURRENT - EL NINO IMPACTS - ECOSYSTEM - EL NINO SOUTHERN OSCILLATION - ENSO

Interacting effects of behavior and oceanography on growth in salmonids with examples for coho salmon (Oncorhynchus kisutch). Snover, M. L., G. M. Watters, and M. Mangel. Canadian Journal of Fisheries and Aquatic Sciences 62:1219-1230. ANADROMOUS FISHES - SALMON - COHO - OCEANOGRAPHY- GROWTH - BEHAVIOR - OCEANOGRAPHY

A krill-predator-fishery model for evaluating candidate management procedures Watters, G.M., J.T. Hinke, K. Reid, and S. Hill CCAMLR Working Group on Ecosystem Monitoring and Management (Yokohama, Japan, 4-15 July 2005), Document no. WG-EMM-05/13 (55 p.)

Global climatological relationships between satellite biological and physical observations and upper ocean properties Wilson, Cara, and Victoria J. Coles Journal of Geophysical Research: Oceans 110(C10):C10001 (14 p.) OCEANOGRAPHY - CLIMATOLOGY - CLIMATE - GLOBAL CLIMATE RELATIONSHIPS - PHYSICAL OBSERVATIONS - SATELLITE BIOLOGICAL - UPPER OCEAN PROPERTIES

Reproductive performance of growth-enhanced transgenic coho salmon Bessey, C., R.H. Devlin, N.R. Liley, and C.A. Biagi Transactions of the American Fisheries Society 133(5):1205-1220

California Current Bograd, S.J. Marine Ecosystems of the North Pacific, PICES Special Publication no. 1, p. 177-191

On the seasonal and interannual migrations of the Transition Zone Chlorophyll Front Bograd, S.J., D.G. Foley, F.B. Schwing, C. Wilson, R.M. Laurs, J.J. Polovina, E.A. Howell, and R.E. Brainard Geophysical Research Letters 31(17):L17204

Remote sensing of new production fuelled by nitrogen fixation Coles, V.J., C. Wilson, and R.R. Hood Geophysical Research Letters 31(6):L06301

The state of the California Current, 2003-2004: A rare “normal” year. Goericke, R., S. Bograd, G. Gaxiola-Castro, J. Gomez-Valdes, R. Hooff, A. Huyer, K. D. Hyrenbach, B. Lavaniegos, A. Mantyla, W. T. Peterson, F. B. Schwing, R. L. Smith, W. J. Sydeman, E. Venrick, and P. A. Wheeler. CalCOFI Reports 45:27-59. OCEANOGRAPHY - CALIFORNIA CURRENT - STATE - NORMAL YEAR

Options for allocating the precautionary catch limit for krill among small-scale management units in the Scotia Sea. Hewitt, R. P., G. Watters, P. N, Trathan, J. P. Croxall, M. E. Goebel, D. Ramm, K. Reid, W. Z. Trivelpiece, and J. L. Watkins CCAMLR Science 11:81-97. INVERTEBRATES - CRUSTACEANS - KRILL - ANTARCTIC KRILL - ANTARCTICA - SCOTIA SEA - CATCH - LIMITS - ALLOCATION - FISHERY - FISHERIES MANAGEMENT

Visualizing the food-web effects of fishing for tunas in the Pacific Ocean Hinke, Jefferson T., Isaac C. Kaplan, Kerim Aydin, George M. Watters, Robert J. Olson, and James F. Kitchell Ecology and Society 9(1):10 (24 p.) MARINE FISHES - TUNAS - TUNA - PACIFIC OCEAN - FISHERIES - FOOD WEBS - EFFECTS

Brainstorming session: Actions for the future Laurs, Michael, and George Watters In: George M. Watters (ed.), Proceedings of the NMFS workshop on building environmentally explicit stock assessments, p. 37. NMFS SWFSC Administrative Report PFEL-04-01.

Historical patterns from 74 years of commercial landings from California waters Mason, J.E. CalCOFI Reports 45:180-190

Access to environmental data [abstract] Mendelssohn, Roy, and Lynn Dewitt In: George M. Watters (ed.), Proceedings of the NMFS workshop on building environmentally explicit stock assessments, p. 13. NMFS SWFSC Administrative Report PFEL-04-01.

Nonstationary seasonality of upper ocean temperature in the California Current Mendelssohn, Roy, Franklin B. Schwing, and Steven J. Bograd Journal of Geophysical Research: Oceans 109(C10):C10015 (16 p.)